Variant report

Variant	rs646053
Chromosome Location	chr11:94268361-94268362
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:94268238..94270129-chr11:94275344..94277340,2	MCF-7	breast:
2	chr11:94253806..94255859-chr11:94267409..94270177,3	K562	blood:

Variant related genes	Relation type
ENSG00000196371	Chromatin interaction
ENSG00000134627	Chromatin interaction

rs_ID	r²[population]
rs12293091	1.00[EUR][1000 genomes]
rs4593975	1.00[EUR][1000 genomes]
rs505417	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs511184	1.00[EUR][1000 genomes]
rs532108	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs608452	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6483328	1.00[EUR][1000 genomes]
rs6483333	1.00[EUR][1000 genomes]
rs687688	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7101762	1.00[EUR][1000 genomes]
rs73523954	1.00[EUR][1000 genomes]
rs73525821	1.00[EUR][1000 genomes]
rs73525842	1.00[EUR][1000 genomes]
rs73525844	1.00[EUR][1000 genomes]
rs73525853	1.00[EUR][1000 genomes]
rs73525861	1.00[EUR][1000 genomes]

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:94260200-94268800	Weak transcription	Fetal Intestine Small	intestine
2	chr11:94260600-94269400	Weak transcription	Osteobl	bone
3	chr11:94262600-94269600	Weak transcription	HSMMtube	muscle
4	chr11:94266400-94271200	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr11:94266600-94268600	Weak transcription	Stomach Mucosa	stomach
6	chr11:94267000-94268800	Weak transcription	Duodenum Mucosa	Duodenum
7	chr11:94267000-94269200	Weak transcription	Rectal Mucosa Donor 29	rectum
8	chr11:94267200-94268800	Weak transcription	Fetal Intestine Large	intestine
9	chr11:94267600-94269400	Weak transcription	Muscle Satellite Cultured Cells	--
10	chr11:94267600-94270200	Weak transcription	Sigmoid Colon	Sigmoid Colon
11	chr11:94267600-94270400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr11:94267600-94276200	Weak transcription	Duodenum Smooth Muscle	Duodenum
13	chr11:94267600-94276400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
14	chr11:94267800-94269200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr11:94267800-94269400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr11:94267800-94269600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr11:94267800-94270200	Weak transcription	Fetal Lung	lung
18	chr11:94267800-94270200	Weak transcription	Right Atrium	heart
19	chr11:94268000-94268400	Weak transcription	Rectal Mucosa Donor 31	rectum
20	chr11:94268000-94269600	Weak transcription	Aorta	Aorta
21	chr11:94268000-94269800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr11:94268000-94270200	Weak transcription	Adipose Nuclei	Adipose
23	chr11:94268000-94270600	Enhancers	Monocytes-CD14+_RO01746	blood

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