Variant report

Variant	rs6472122
Chromosome Location	chr8:64692560-64692561
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10957293	0.80[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs10957294	0.80[AFR][1000 genomes]
rs10957295	0.89[ASN][1000 genomes]
rs12675689	0.89[ASN][1000 genomes]
rs12678656	0.83[ASN][1000 genomes]
rs12682101	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs1520921	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16930623	0.83[ASN][1000 genomes]
rs17288060	0.83[ASN][1000 genomes]
rs2355593	0.89[ASN][1000 genomes]
rs28685087	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58291047	0.80[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs73686537	0.83[ASN][1000 genomes]
rs7465464	1.00[CEU][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831344	chr8:64658229-64712338	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64691200-64700800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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