Variant report

Variant rs6476018
Chromosome Location chr9:2793659-2793660
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:2775000-2801600 Weak transcription Colon Smooth Muscle Colon
2 chr9:2777800-2800000 Weak transcription Colonic Mucosa Colon
3 chr9:2778000-2794400 Weak transcription Psoas Muscle Psoas
4 chr9:2778000-2801600 Weak transcription Small Intestine intestine
5 chr9:2778000-2801800 Weak transcription Gastric stomach
6 chr9:2778000-2803200 Weak transcription Aorta Aorta
7 chr9:2778400-2800200 Weak transcription Rectal Smooth Muscle rectum
8 chr9:2778600-2801400 Weak transcription Fetal Brain Male brain
9 chr9:2778600-2801600 Weak transcription Placenta Amnion Placenta Amnion
10 chr9:2778800-2798200 Weak transcription Brain Cingulate Gyrus brain
11 chr9:2778800-2799600 Weak transcription Brain Angular Gyrus brain
12 chr9:2778800-2800000 Weak transcription Brain Inferior Temporal Lobe brain
13 chr9:2778800-2802800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr9:2779200-2801600 Weak transcription Brain Substantia Nigra brain
15 chr9:2782400-2800800 Strong transcription Breast Myoepithelial Primary Cells Breast
16 chr9:2783200-2798800 Weak transcription Fetal Kidney kidney
17 chr9:2786400-2797000 Weak transcription Fetal Heart heart
18 chr9:2786400-2800400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr9:2786800-2796000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr9:2787200-2802200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr9:2787600-2808000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr9:2787800-2793800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr9:2787800-2793800 Strong transcription Adipose Nuclei Adipose
24 chr9:2787800-2798400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr9:2787800-2801800 Strong transcription Muscle Satellite Cultured Cells --
26 chr9:2787800-2812200 Strong transcription Fetal Muscle Trunk muscle
27 chr9:2788000-2793800 Strong transcription Duodenum Smooth Muscle Duodenum
28 chr9:2788200-2795600 Strong transcription HMEC breast
29 chr9:2788200-2800200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr9:2788400-2809400 Strong transcription Fetal Adrenal Gland Adrenal Gland
31 chr9:2789000-2798000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr9:2789000-2809000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr9:2789400-2798600 Strong transcription Osteobl bone
34 chr9:2790200-2793800 Strong transcription Sigmoid Colon Sigmoid Colon
35 chr9:2790200-2794400 Strong transcription Brain Hippocampus Middle brain
36 chr9:2790400-2798000 Weak transcription ES-WA7 Cell Line embryonic stem cell
37 chr9:2790600-2800200 Strong transcription NHEK skin
38 chr9:2790800-2793800 Strong transcription Fetal Stomach stomach
39 chr9:2790800-2793800 Strong transcription NHLF lung
40 chr9:2791000-2794400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr9:2791200-2793800 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
42 chr9:2791200-2795800 Strong transcription NHDF-Ad bronchial
43 chr9:2791400-2794000 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
44 chr9:2791400-2798200 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr9:2791600-2798000 Weak transcription Primary T killer memory cells from peripheral blood blood
46 chr9:2791600-2798400 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr9:2791600-2800000 Weak transcription Placenta Placenta
48 chr9:2791600-2815800 Weak transcription Pancreatic Islets Pancreatic Islet
49 chr9:2791800-2795600 Strong transcription Cortex derived primary cultured neurospheres brain
50 chr9:2791800-2796200 Weak transcription HUVEC blood vessel

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