Variant report

Variant rs6477200
Chromosome Location chr9:750636-750637
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:733400-751000 Strong transcription Fetal Intestine Small intestine
2 chr9:739200-751600 Weak transcription Hela-S3 cervix
3 chr9:742000-756000 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr9:742400-751200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr9:743000-751600 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr9:743000-751600 Weak transcription A549 lung
7 chr9:743200-751200 Weak transcription H1 Cell Line embryonic stem cell
8 chr9:743200-751600 Weak transcription Fetal Kidney kidney
9 chr9:743400-756000 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr9:743800-751200 Weak transcription Fetal Adrenal Gland Adrenal Gland
11 chr9:745000-751200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr9:745200-750800 Weak transcription Placenta Amnion Placenta Amnion
13 chr9:745200-751600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr9:745400-750800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr9:745400-751000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr9:745400-751800 Weak transcription Stomach Mucosa stomach
17 chr9:745600-755800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr9:745600-761000 Weak transcription Ovary ovary
19 chr9:745600-763800 Weak transcription Rectal Smooth Muscle rectum
20 chr9:745800-751200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr9:745800-757600 Weak transcription Gastric stomach
22 chr9:746400-750800 Weak transcription Brain Substantia Nigra brain
23 chr9:746400-751200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr9:746400-751400 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr9:746400-751800 Weak transcription Colon Smooth Muscle Colon
26 chr9:746400-756000 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr9:746600-751200 Weak transcription NHLF lung
28 chr9:747000-751600 Enhancers Pancreas Pancrea
29 chr9:747000-752200 Enhancers Fetal Thymus thymus
30 chr9:747000-754000 Enhancers Placenta Placenta
31 chr9:747200-752000 Enhancers Esophagus oesophagus
32 chr9:747400-751200 Weak transcription HUVEC blood vessel
33 chr9:747600-750800 Enhancers Primary T killer naive cells fromperipheralblood blood
34 chr9:747600-752000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
35 chr9:747600-754600 Weak transcription HepG2 liver
36 chr9:747600-755800 Weak transcription Duodenum Mucosa Duodenum
37 chr9:747800-752400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr9:747800-753000 Enhancers HMEC breast
39 chr9:748000-751000 Enhancers Primary Natural Killer cells fromperipheralblood blood
40 chr9:748000-752000 Enhancers Primary T cells fromperipheralblood blood
41 chr9:748000-752000 Enhancers Primary T helper cells PMA-I stimulated --
42 chr9:748000-752000 Strong transcription Liver Liver
43 chr9:748000-753200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
44 chr9:748200-752400 Enhancers HSMM muscle
45 chr9:748400-751400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr9:748400-751800 Weak transcription Fetal Stomach stomach
47 chr9:748600-752000 Enhancers Primary T helper cells fromperipheralblood blood
48 chr9:748800-751000 Enhancers Primary T helper 17 cells PMA-I stimulated --
49 chr9:748800-751000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr9:748800-751600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived

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