The 2.0 version of rSNPBase

Variant report

Variant rs6484695
Chromosome Location chr11:34086571-34086572
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:34075400-34087000 Weak transcription Gastric stomach
2 chr11:34075400-34094200 Weak transcription Placenta Amnion Placenta Amnion
3 chr11:34075400-34094400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr11:34075400-34103800 Weak transcription Aorta Aorta
5 chr11:34075600-34088400 Weak transcription Right Atrium heart
6 chr11:34075600-34093600 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr11:34075600-34100200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr11:34075800-34093600 Weak transcription HSMMtube muscle
9 chr11:34076200-34089400 Weak transcription H9 Cell Line embryonic stem cell
10 chr11:34077000-34100600 Weak transcription Esophagus oesophagus
11 chr11:34077200-34087800 Strong transcription Fetal Thymus thymus
12 chr11:34077200-34088600 Weak transcription Ovary ovary
13 chr11:34077400-34089200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr11:34077400-34090200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr11:34077400-34094800 Weak transcription Colonic Mucosa Colon
16 chr11:34078200-34087800 Strong transcription HUES6 Cell Line embryonic stem cell
17 chr11:34078200-34092000 Weak transcription Stomach Mucosa stomach
18 chr11:34078800-34089400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr11:34079000-34089200 Weak transcription Stomach Smooth Muscle stomach
20 chr11:34079000-34089400 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr11:34079000-34092600 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr11:34079000-34094000 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr11:34079000-34095000 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr11:34079000-34126600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr11:34079200-34087800 Strong transcription iPS-20b Cell Line embryonic stem cell
26 chr11:34079600-34089600 Weak transcription Fetal Brain Male brain
27 chr11:34079800-34089200 Weak transcription Brain Hippocampus Middle brain
28 chr11:34080000-34087200 Strong transcription HUES48 Cell Line embryonic stem cell
29 chr11:34080200-34087000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr11:34080800-34089400 Weak transcription Brain Angular Gyrus brain
31 chr11:34081200-34087200 Weak transcription Brain Germinal Matrix brain
32 chr11:34081200-34089400 Weak transcription Brain Cingulate Gyrus brain
33 chr11:34081400-34089600 Weak transcription Brain Inferior Temporal Lobe brain
34 chr11:34081400-34090000 Strong transcription Dnd41 blood
35 chr11:34082000-34087600 Genic enhancers Primary T helper cells fromperipheralblood blood
36 chr11:34082200-34087600 Strong transcription Monocytes-CD14+_RO01746 blood
37 chr11:34082400-34087000 Weak transcription Liver Liver
38 chr11:34082400-34087000 Weak transcription NHDF-Ad bronchial
39 chr11:34082600-34087200 Strong transcription HSMM muscle
40 chr11:34082800-34087000 Strong transcription Primary B cells from peripheral blood blood
41 chr11:34082800-34087000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr11:34083200-34089000 Weak transcription Right Ventricle heart
43 chr11:34083400-34087400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr11:34083400-34088600 Weak transcription Left Ventricle heart
45 chr11:34083400-34088600 Weak transcription Spleen Spleen
46 chr11:34083400-34089200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr11:34083400-34089400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
48 chr11:34083400-34126600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
49 chr11:34083600-34087400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr11:34083600-34091800 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015