The 2.0 version of rSNPBase

Variant report

Variant rs6486226
Chromosome Location chr11:9256325-9256326
allele A/C/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:9250800-9257800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr11:9251000-9271600 Weak transcription Hela-S3 cervix
3 chr11:9251000-9274400 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr11:9251400-9271800 Weak transcription Gastric stomach
5 chr11:9252600-9264000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr11:9252600-9272400 Weak transcription Spleen Spleen
7 chr11:9252600-9272800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr11:9252800-9263800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr11:9253000-9261800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr11:9253000-9262200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr11:9253000-9265000 Weak transcription K562 blood
12 chr11:9253000-9285600 Weak transcription Placenta Amnion Placenta Amnion
13 chr11:9253200-9261200 Weak transcription Left Ventricle heart
14 chr11:9253200-9269600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr11:9253200-9274600 Weak transcription Fetal Muscle Trunk muscle
16 chr11:9253600-9258000 Weak transcription Primary T cells fromperipheralblood blood
17 chr11:9253600-9268200 Weak transcription HepG2 liver
18 chr11:9253800-9261400 Weak transcription Fetal Heart heart
19 chr11:9253800-9271400 Weak transcription HSMM muscle
20 chr11:9254000-9263800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr11:9254000-9263800 Weak transcription Muscle Satellite Cultured Cells --
22 chr11:9254200-9267600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr11:9254400-9256400 Weak transcription GM12878-XiMat blood
24 chr11:9254400-9256600 Enhancers Brain Substantia Nigra brain
25 chr11:9254400-9256800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr11:9254400-9257200 Weak transcription Primary neutrophils fromperipheralblood blood
27 chr11:9254400-9258000 Weak transcription Monocytes-CD14+_RO01746 blood
28 chr11:9254400-9258200 Weak transcription Small Intestine intestine
29 chr11:9254400-9261400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr11:9254400-9261800 Weak transcription Primary T helper cells PMA-I stimulated --
31 chr11:9254400-9262600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr11:9254400-9263800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr11:9254400-9264200 Weak transcription HUVEC blood vessel
34 chr11:9254400-9267600 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr11:9254400-9271600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr11:9254400-9271800 Weak transcription Osteobl bone
37 chr11:9254400-9272400 Weak transcription Ovary ovary
38 chr11:9254400-9274600 Weak transcription Colon Smooth Muscle Colon
39 chr11:9254400-9280600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr11:9254600-9256400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr11:9254600-9257200 Weak transcription Primary T killer naive cells fromperipheralblood blood
42 chr11:9254600-9258000 Weak transcription Primary monocytes fromperipheralblood blood
43 chr11:9254600-9258000 Weak transcription Primary hematopoietic stem cells blood
44 chr11:9254600-9262400 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr11:9254600-9263600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr11:9254600-9267600 Weak transcription Primary T helper naive cells from peripheral blood blood
47 chr11:9254800-9257200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr11:9254800-9258200 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr11:9255200-9258400 Weak transcription Primary T cells from cord blood blood
50 chr11:9255200-9262400 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015