Variant report
| Variant | rs6489549 |
|---|---|
| Chromosome Location | chr12:4616808-4616809 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:4590800-4631200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 2 | chr12:4592400-4647200 | Weak transcription | Esophagus | oesophagus |
| 3 | chr12:4593400-4628600 | Weak transcription | Right Ventricle | heart |
| 4 | chr12:4594400-4646400 | Weak transcription | NHLF | lung |
| 5 | chr12:4594800-4625400 | Weak transcription | Psoas Muscle | Psoas |
| 6 | chr12:4594800-4647000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 7 | chr12:4595400-4628600 | Weak transcription | A549 | lung |
| 8 | chr12:4596000-4647200 | Weak transcription | Small Intestine | intestine |
| 9 | chr12:4596400-4629000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 10 | chr12:4596600-4618000 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 11 | chr12:4596600-4633400 | Weak transcription | Hela-S3 | cervix |
| 12 | chr12:4596600-4640400 | Weak transcription | Brain Angular Gyrus | brain |
| 13 | chr12:4596800-4617800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 14 | chr12:4598200-4647000 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 15 | chr12:4598400-4646800 | Weak transcription | Fetal Brain Male | brain |
| 16 | chr12:4599200-4647200 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 17 | chr12:4606200-4647200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 18 | chr12:4608200-4647200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 19 | chr12:4608600-4625600 | Weak transcription | Pancreas | Pancrea |
| 20 | chr12:4608600-4625800 | Weak transcription | Aorta | Aorta |
| 21 | chr12:4608600-4628800 | Weak transcription | Gastric | stomach |
| 22 | chr12:4608600-4629000 | Weak transcription | Brain Germinal Matrix | brain |
| 23 | chr12:4608600-4629400 | Weak transcription | Spleen | Spleen |
| 24 | chr12:4609000-4627200 | Weak transcription | Lung | lung |
| 25 | chr12:4609000-4633400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 26 | chr12:4609400-4617400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 27 | chr12:4609600-4640400 | Weak transcription | Fetal Kidney | kidney |
| 28 | chr12:4609600-4642400 | Weak transcription | Brain Substantia Nigra | brain |
| 29 | chr12:4609800-4640800 | Weak transcription | Fetal Brain Female | brain |
| 30 | chr12:4610200-4617600 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 31 | chr12:4610800-4647200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 32 | chr12:4611200-4628800 | Weak transcription | Fetal Stomach | stomach |
| 33 | chr12:4611200-4647000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 34 | chr12:4611400-4627200 | Weak transcription | Ovary | ovary |
| 35 | chr12:4611600-4625200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 36 | chr12:4611600-4625600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 37 | chr12:4611600-4628800 | Weak transcription | Brain Anterior Caudate | brain |
| 38 | chr12:4612400-4624400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 39 | chr12:4612400-4627200 | Weak transcription | Fetal Muscle Leg | muscle |
| 40 | chr12:4612600-4629000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 41 | chr12:4613400-4625600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 42 | chr12:4613400-4627200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 43 | chr12:4613400-4628000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 44 | chr12:4613600-4617800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 45 | chr12:4613600-4624400 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 46 | chr12:4613600-4631000 | Weak transcription | HUVEC | blood vessel |
| 47 | chr12:4614200-4617000 | Enhancers | HSMM | muscle |
| 48 | chr12:4614200-4624200 | Weak transcription | Placenta | Placenta |
| 49 | chr12:4614200-4624600 | Weak transcription | Fetal Intestine Large | intestine |
| 50 | chr12:4614200-4628800 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
