Variant report

Variant rs649639
Chromosome Location chr1:10490285-10490286
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10480200-10490400 Weak transcription Aorta Aorta
2 chr1:10489800-10490400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
3 chr1:10489800-10490400 Flanking Active TSS Primary T cells from cord blood blood
4 chr1:10489800-10490400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
5 chr1:10489800-10490400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr1:10489800-10490400 Flanking Active TSS Adipose Nuclei Adipose
7 chr1:10489800-10490400 Flanking Active TSS Brain Hippocampus Middle brain
8 chr1:10489800-10490400 Flanking Active TSS Brain Inferior Temporal Lobe brain
9 chr1:10489800-10490400 Enhancers Lung lung
10 chr1:10489800-10490400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
11 chr1:10489800-10490400 Flanking Active TSS Dnd41 blood
12 chr1:10489800-10490400 Flanking Active TSS GM12878-XiMat blood
13 chr1:10489800-10490400 Flanking Active TSS Hela-S3 cervix
14 chr1:10489800-10490400 Flanking Active TSS K562 blood
15 chr1:10489800-10491400 Active TSS iPS-15b Cell Line embryonic stem cell
16 chr1:10489800-10491400 Active TSS Brain Germinal Matrix brain
17 chr1:10489800-10491600 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr1:10489800-10491600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
19 chr1:10490000-10490400 Flanking Active TSS H1 Cell Line embryonic stem cell
20 chr1:10490000-10490400 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr1:10490000-10490400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
22 chr1:10490000-10490400 Flanking Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr1:10490000-10490400 Flanking Active TSS HUES6 Cell Line embryonic stem cell
24 chr1:10490000-10490400 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
25 chr1:10490000-10490400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr1:10490000-10490400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr1:10490000-10490400 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
28 chr1:10490000-10490400 Flanking Active TSS Primary monocytes fromperipheralblood blood
29 chr1:10490000-10490400 Flanking Active TSS Primary B cells from peripheral blood blood
30 chr1:10490000-10490400 Flanking Active TSS Primary T cells fromperipheralblood blood
31 chr1:10490000-10490400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
32 chr1:10490000-10490400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
33 chr1:10490000-10490400 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
34 chr1:10490000-10490400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
35 chr1:10490000-10490400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
36 chr1:10490000-10490400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
37 chr1:10490000-10490400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
38 chr1:10490000-10490400 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
39 chr1:10490000-10490400 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
40 chr1:10490000-10490400 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
41 chr1:10490000-10490400 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
42 chr1:10490000-10490400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr1:10490000-10490400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr1:10490000-10490400 Flanking Active TSS Muscle Satellite Cultured Cells --
45 chr1:10490000-10490400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
46 chr1:10490000-10490400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
47 chr1:10490000-10490400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr1:10490000-10490400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr1:10490000-10490400 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
50 chr1:10490000-10490400 Flanking Active TSS Liver Liver

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