Variant report

Variant	rs650767
Chromosome Location	chr11:100704709-100704710
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:100702367..100705354-chr11:100707179..100710105,2	K562	blood:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs527132	1.00[AFR][1000 genomes]
rs532256	0.81[AFR][1000 genomes]
rs599222	0.81[AFR][1000 genomes]
rs619947	0.83[AFR][1000 genomes]
rs658646	0.91[AFR][1000 genomes]
rs683956	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530643	chr11:100196082-100713156	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:100698800-100712400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr11:100699600-100722400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr11:100700000-100704800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr11:100700800-100704800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr11:100701000-100705400	Enhancers	HSMM	muscle
6	chr11:100701600-100705400	Enhancers	HSMMtube	muscle
7	chr11:100701600-100708200	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr11:100701600-100717000	Weak transcription	Fetal Kidney	kidney
9	chr11:100702000-100706600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
10	chr11:100702600-100704800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr11:100702800-100705400	Enhancers	A549	lung
12	chr11:100702800-100707000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr11:100703000-100705200	Weak transcription	Psoas Muscle	Psoas
14	chr11:100703000-100706200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr11:100703000-100706800	Weak transcription	HUES48 Cell Line	embryonic stem cell
16	chr11:100703000-100707400	Weak transcription	NH-A	brain
17	chr11:100703000-100707600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
18	chr11:100703000-100710800	Weak transcription	H1 Cell Line	embryonic stem cell
19	chr11:100703000-100731800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
20	chr11:100703200-100707800	Weak transcription	HUES6 Cell Line	embryonic stem cell
21	chr11:100703800-100704800	Enhancers	Liver	Liver
22	chr11:100703800-100707400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
23	chr11:100703800-100712400	Weak transcription	Left Ventricle	heart
24	chr11:100704000-100707600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
25	chr11:100704200-100704800	Weak transcription	Fetal Heart	heart
26	chr11:100704200-100705200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr11:100704400-100705000	Weak transcription	Stomach Mucosa	stomach
28	chr11:100704400-100710200	Weak transcription	Fetal Muscle Leg	muscle
29	chr11:100704600-100706600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr11:100704600-100706800	Weak transcription	NHDF-Ad	bronchial
31	chr11:100704600-100707200	Weak transcription	HUES64 Cell Line	embryonic stem cell
32	chr11:100704600-100708000	Weak transcription	Cortex derived primary cultured neurospheres	brain
33	chr11:100704600-100719600	Weak transcription	Sigmoid Colon	Sigmoid Colon

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