Variant report

Variant	rs6507752
Chromosome Location	chr18:45025095-45025096
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 4 )

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs1434502	0.80[ASN][1000 genomes]
rs55881359	0.84[EUR][1000 genomes]
rs62097086	0.81[ASN][1000 genomes]
rs6507751	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6507753	0.93[YRI][hapmap]
rs9963812	0.88[ASN][1000 genomes]

mRNA abundance (count:4)

SNP	Gene	Cis/trans	Tissue	Source
rs6507752	ID2	trans	lymphoblastoid	seeQTL
rs6507752	SPRY2	trans	lymphoblastoid	seeQTL
rs6507752	SIRPG	trans	lymphoblastoid	seeQTL
rs6507752	ASCL1	trans	lymphoblastoid	seeQTL

Chromatin state (count:0 , 50 per page) page:

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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