The 2.0 version of rSNPBase

Variant report

Variant rs652272
Chromosome Location chr1:85436118-85436119
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:14 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85431400-85437600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr1:85434400-85436600 Weak transcription Primary T helper cells PMA-I stimulated --
3 chr1:85434600-85437400 Weak transcription Fetal Intestine Large intestine
4 chr1:85434600-85437400 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:85434600-85437800 Weak transcription Fetal Intestine Small intestine
6 chr1:85434800-85436400 Enhancers Placenta Placenta
7 chr1:85435200-85440400 Enhancers Primary T helper 17 cells PMA-I stimulated --
8 chr1:85435400-85437600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr1:85435600-85437000 Flanking Active TSS GM12878-XiMat blood
10 chr1:85435600-85437400 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr1:85435600-85438400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr1:85435800-85436800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr1:85435800-85437400 Weak transcription Primary B cells from peripheral blood blood
14 chr1:85436000-85437400 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015