Variant report

Variant rs653343
Chromosome Location chr11:64606177-64606178
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:64582600-64609600 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr11:64582600-64611000 Weak transcription Primary B cells from cord blood blood
3 chr11:64590600-64609400 Weak transcription Fetal Lung lung
4 chr11:64591000-64610600 Weak transcription Rectal Smooth Muscle rectum
5 chr11:64591200-64609600 Strong transcription Fetal Intestine Small intestine
6 chr11:64591200-64611600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr11:64591600-64611200 Weak transcription Small Intestine intestine
8 chr11:64592800-64608200 Strong transcription iPS-15b Cell Line embryonic stem cell
9 chr11:64593000-64608400 Strong transcription HUES6 Cell Line embryonic stem cell
10 chr11:64593400-64607400 Strong transcription Rectal Mucosa Donor 31 rectum
11 chr11:64593400-64608200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr11:64593400-64611000 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr11:64593800-64611400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr11:64594400-64609600 Strong transcription Colonic Mucosa Colon
15 chr11:64595400-64608600 Strong transcription Fetal Stomach stomach
16 chr11:64596000-64611600 Weak transcription Right Atrium heart
17 chr11:64596200-64609400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr11:64596600-64609600 Weak transcription K562 blood
19 chr11:64597400-64611400 Weak transcription Liver Liver
20 chr11:64597600-64608400 Strong transcription Rectal Mucosa Donor 29 rectum
21 chr11:64597600-64611200 Weak transcription Fetal Thymus thymus
22 chr11:64597800-64611400 Weak transcription Primary hematopoietic stem cells blood
23 chr11:64597800-64611400 Weak transcription Fetal Kidney kidney
24 chr11:64598000-64606400 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr11:64598000-64610800 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr11:64600000-64606200 Weak transcription Ovary ovary
27 chr11:64600600-64608000 Strong transcription Fetal Intestine Large intestine
28 chr11:64601200-64609800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr11:64602000-64608400 Genic enhancers Breast Myoepithelial Primary Cells Breast
30 chr11:64603200-64606800 Weak transcription Fetal Muscle Leg muscle
31 chr11:64603200-64610600 Weak transcription HSMMtube muscle
32 chr11:64603400-64609200 Weak transcription Stomach Mucosa stomach
33 chr11:64603400-64609400 Weak transcription Hela-S3 cervix
34 chr11:64603600-64608000 Strong transcription Placenta Amnion Placenta Amnion
35 chr11:64603600-64609800 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr11:64603800-64607400 Strong transcription Placenta Placenta
37 chr11:64603800-64608600 Strong transcription Duodenum Mucosa Duodenum
38 chr11:64603800-64611000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr11:64604000-64608200 Strong transcription Pancreas Pancrea
40 chr11:64604000-64609200 Weak transcription A549 lung
41 chr11:64604000-64610600 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
42 chr11:64604400-64608000 Strong transcription Primary T cells from cord blood blood
43 chr11:64604600-64608200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr11:64604800-64607200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr11:64605000-64606800 Weak transcription Primary T regulatory cells fromperipheralblood blood
46 chr11:64605000-64610000 Strong transcription Sigmoid Colon Sigmoid Colon
47 chr11:64605000-64610400 Weak transcription Primary B cells from peripheral blood blood
48 chr11:64605000-64611200 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr11:64605200-64607600 Strong transcription H1 Cell Line embryonic stem cell
50 chr11:64605200-64608000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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