Variant report
| Variant | rs6539697 |
|---|---|
| Chromosome Location | chr12:83386825-83386826 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:83357800-83389600 | Weak transcription | Fetal Intestine Large | intestine |
| 2 | chr12:83358000-83389600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 3 | chr12:83358400-83397600 | Weak transcription | Brain Anterior Caudate | brain |
| 4 | chr12:83358400-83409200 | Weak transcription | Brain Angular Gyrus | brain |
| 5 | chr12:83358600-83394200 | Weak transcription | Fetal Muscle Leg | muscle |
| 6 | chr12:83358600-83399600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 7 | chr12:83358600-83409400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 8 | chr12:83367400-83391800 | Weak transcription | Small Intestine | intestine |
| 9 | chr12:83368800-83393800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 10 | chr12:83368800-83399200 | Weak transcription | Esophagus | oesophagus |
| 11 | chr12:83374600-83390000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 12 | chr12:83375600-83405600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 13 | chr12:83377600-83400000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 14 | chr12:83377600-83409400 | Weak transcription | Brain Hippocampus Middle | brain |
| 15 | chr12:83377800-83410200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 16 | chr12:83378000-83389200 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 17 | chr12:83378200-83391800 | Weak transcription | Fetal Heart | heart |
| 18 | chr12:83378400-83394200 | Weak transcription | Lung | lung |
| 19 | chr12:83378400-83409600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 20 | chr12:83378600-83389600 | Weak transcription | Pancreas | Pancrea |
| 21 | chr12:83378800-83409000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 22 | chr12:83379000-83389800 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 23 | chr12:83379200-83397000 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 24 | chr12:83379800-83393200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 25 | chr12:83380000-83394200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 26 | chr12:83380000-83403200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 27 | chr12:83380000-83409200 | Weak transcription | Gastric | stomach |
| 28 | chr12:83380200-83397200 | Weak transcription | Brain Substantia Nigra | brain |
| 29 | chr12:83381800-83399400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 30 | chr12:83382000-83388200 | Weak transcription | Fetal Intestine Small | intestine |
| 31 | chr12:83382000-83393000 | Weak transcription | Fetal Lung | lung |
| 32 | chr12:83382400-83399000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 33 | chr12:83382600-83399200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 34 | chr12:83382800-83388200 | Weak transcription | Fetal Kidney | kidney |
| 35 | chr12:83384000-83397000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 36 | chr12:83384400-83389200 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 37 | chr12:83384800-83391000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 38 | chr12:83386000-83404200 | Weak transcription | Colon Smooth Muscle | Colon |
| 39 | chr12:83386200-83391400 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 40 | chr12:83386200-83403600 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 41 | chr12:83386600-83389400 | Weak transcription | Left Ventricle | heart |
| 42 | chr12:83386600-83394200 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 43 | chr12:83386800-83388200 | Strong transcription | Fetal Stomach | stomach |
