Variant report

Variant rs6543660
Chromosome Location chr2:32863945-32863946
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:32853600-32934600 Weak transcription Small Intestine intestine
2 chr2:32853800-32865000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr2:32853800-32865000 Weak transcription Esophagus oesophagus
4 chr2:32853800-32865200 Weak transcription Fetal Heart heart
5 chr2:32853800-32865400 Weak transcription H1 Cell Line embryonic stem cell
6 chr2:32853800-32865400 Weak transcription Brain Angular Gyrus brain
7 chr2:32853800-32866200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr2:32853800-32870200 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr2:32853800-32870800 Weak transcription H9 Cell Line embryonic stem cell
10 chr2:32853800-32872000 Weak transcription NHLF lung
11 chr2:32853800-32880800 Weak transcription Colonic Mucosa Colon
12 chr2:32853800-32881400 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr2:32853800-32883000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr2:32853800-32894000 Weak transcription Thymus Thymus
15 chr2:32854000-32877600 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr2:32854200-32880200 Weak transcription Stomach Mucosa stomach
17 chr2:32854400-32865000 Weak transcription Spleen Spleen
18 chr2:32854400-32866200 Weak transcription Fetal Brain Male brain
19 chr2:32854400-32870400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
20 chr2:32854600-32864800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr2:32854800-32869800 Strong transcription Fetal Muscle Trunk muscle
22 chr2:32855000-32872400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
23 chr2:32855000-32913600 Weak transcription HMEC breast
24 chr2:32855200-32866200 Weak transcription Colon Smooth Muscle Colon
25 chr2:32855200-32867600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr2:32855200-32869600 Strong transcription Primary T cells fromperipheralblood blood
27 chr2:32855200-32870800 Strong transcription Primary T helper cells fromperipheralblood blood
28 chr2:32855200-32896400 Weak transcription NHEK skin
29 chr2:32855400-32870600 Strong transcription Liver Liver
30 chr2:32855600-32871000 Strong transcription Primary B cells from peripheral blood blood
31 chr2:32855600-32885600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr2:32855800-32869200 Strong transcription Primary T cells from cord blood blood
33 chr2:32855800-32869400 Strong transcription Primary T regulatory cells fromperipheralblood blood
34 chr2:32855800-32869600 Strong transcription Adipose Nuclei Adipose
35 chr2:32855800-32870200 Strong transcription Skeletal Muscle Female skeletal muscle
36 chr2:32856000-32875000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
37 chr2:32856400-32867600 Weak transcription Psoas Muscle Psoas
38 chr2:32856800-32869000 Strong transcription Dnd41 blood
39 chr2:32857200-32869400 Strong transcription Sigmoid Colon Sigmoid Colon
40 chr2:32857200-32869800 Strong transcription Fetal Adrenal Gland Adrenal Gland
41 chr2:32857400-32869200 Strong transcription Primary monocytes fromperipheralblood blood
42 chr2:32857600-32869800 Strong transcription HepG2 liver
43 chr2:32857800-32867800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
44 chr2:32857800-32869200 Strong transcription Fetal Intestine Large intestine
45 chr2:32857800-32869600 Strong transcription Primary T helper naive cells fromperipheralblood blood
46 chr2:32858000-32870200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr2:32858000-32870600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr2:32858200-32869800 Strong transcription Breast Myoepithelial Primary Cells Breast
49 chr2:32858200-32870600 Strong transcription Primary T helper cells PMA-I stimulated --
50 chr2:32858200-32879800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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