The 2.0 version of rSNPBase

Variant report

Variant rs6544188
Chromosome Location chr2:39263871-39263872
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:39213800-39308000 Weak transcription Pancreas Pancrea
2 chr2:39227600-39303400 Weak transcription Colonic Mucosa Colon
3 chr2:39229800-39293000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr2:39232600-39300000 Weak transcription Brain Cingulate Gyrus brain
5 chr2:39235400-39312000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr2:39235600-39293200 Weak transcription Fetal Brain Male brain
7 chr2:39235600-39295800 Weak transcription NHLF lung
8 chr2:39235600-39298200 Weak transcription Small Intestine intestine
9 chr2:39235600-39327800 Weak transcription Esophagus oesophagus
10 chr2:39235800-39284000 Weak transcription Brain Inferior Temporal Lobe brain
11 chr2:39235800-39293600 Weak transcription Placenta Amnion Placenta Amnion
12 chr2:39236000-39295600 Weak transcription Aorta Aorta
13 chr2:39236000-39295800 Weak transcription H9 Cell Line embryonic stem cell
14 chr2:39236000-39305600 Weak transcription Gastric stomach
15 chr2:39236200-39305600 Weak transcription Lung lung
16 chr2:39240800-39299200 Weak transcription Brain Hippocampus Middle brain
17 chr2:39241600-39276400 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr2:39241600-39292800 Weak transcription GM12878-XiMat blood
19 chr2:39243200-39299600 Weak transcription Brain Substantia Nigra brain
20 chr2:39244600-39295400 Weak transcription Rectal Smooth Muscle rectum
21 chr2:39246600-39274000 Weak transcription Fetal Kidney kidney
22 chr2:39250000-39282200 Weak transcription Brain Anterior Caudate brain
23 chr2:39250000-39292800 Weak transcription Psoas Muscle Psoas
24 chr2:39250200-39295200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr2:39250200-39313600 Weak transcription Brain Angular Gyrus brain
26 chr2:39250400-39295600 Weak transcription NH-A brain
27 chr2:39250400-39303000 Weak transcription Primary T helper naive cells fromperipheralblood blood
28 chr2:39250600-39279800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr2:39251000-39277000 Weak transcription K562 blood
30 chr2:39251000-39293000 Weak transcription HMEC breast
31 chr2:39251600-39327200 Weak transcription HUVEC blood vessel
32 chr2:39252200-39279200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr2:39252400-39274000 Weak transcription A549 lung
34 chr2:39252400-39292400 Weak transcription NHEK skin
35 chr2:39254200-39277200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr2:39255000-39299000 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr2:39255400-39278200 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr2:39255600-39274600 Weak transcription Brain Germinal Matrix brain
39 chr2:39255800-39277600 Weak transcription iPS-18 Cell Line embryonic stem cell
40 chr2:39258200-39277600 Weak transcription Primary T cells from cord blood blood
41 chr2:39258200-39293400 Weak transcription Ovary ovary
42 chr2:39258400-39270600 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr2:39258400-39273800 Weak transcription Fetal Brain Female brain
44 chr2:39258400-39274000 Weak transcription Primary B cells from peripheral blood blood
45 chr2:39258400-39276400 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr2:39258400-39282600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr2:39258400-39292800 Weak transcription HSMMtube muscle
48 chr2:39258400-39295800 Weak transcription Colon Smooth Muscle Colon
49 chr2:39258400-39299200 Weak transcription H1 Cell Line embryonic stem cell
50 chr2:39258400-39322400 Weak transcription Thymus Thymus

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015