The 2.0 version of rSNPBase

Variant report

Variant rs6546042
Chromosome Location chr2:64202664-64202665
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:64114000-64212000 Weak transcription Small Intestine intestine
2 chr2:64130400-64211200 Weak transcription Fetal Brain Male brain
3 chr2:64137400-64204800 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr2:64139800-64220600 Weak transcription Brain Cingulate Gyrus brain
5 chr2:64154800-64242600 Weak transcription Aorta Aorta
6 chr2:64159600-64211600 Weak transcription H1 Cell Line embryonic stem cell
7 chr2:64163200-64207600 Weak transcription HUVEC blood vessel
8 chr2:64168800-64204800 Weak transcription Psoas Muscle Psoas
9 chr2:64169000-64215000 Weak transcription Brain Angular Gyrus brain
10 chr2:64173600-64202800 Weak transcription Fetal Brain Female brain
11 chr2:64175200-64203000 Weak transcription Thymus Thymus
12 chr2:64175600-64213000 Weak transcription Brain Inferior Temporal Lobe brain
13 chr2:64175800-64202800 Weak transcription Gastric stomach
14 chr2:64176000-64204600 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr2:64176000-64228000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr2:64176200-64205400 Weak transcription Placenta Amnion Placenta Amnion
17 chr2:64176400-64205000 Weak transcription Brain Germinal Matrix brain
18 chr2:64177600-64204600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr2:64177600-64212600 Weak transcription Colon Smooth Muscle Colon
20 chr2:64178200-64211400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr2:64183800-64204400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr2:64184000-64205200 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr2:64185600-64203800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr2:64185800-64245000 Weak transcription H9 Cell Line embryonic stem cell
25 chr2:64186800-64216200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr2:64187600-64202800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr2:64187600-64203200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr2:64187600-64210200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr2:64187600-64211400 Strong transcription Monocytes-CD14+_RO01746 blood
30 chr2:64187800-64210200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr2:64187800-64211200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr2:64188000-64210000 Strong transcription Primary neutrophils fromperipheralblood blood
33 chr2:64189600-64204800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr2:64189800-64204800 Weak transcription A549 lung
35 chr2:64189800-64205000 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr2:64190000-64203000 Weak transcription Primary B cells from peripheral blood blood
37 chr2:64190000-64205200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr2:64190000-64212000 Weak transcription Stomach Mucosa stomach
39 chr2:64190000-64212800 Weak transcription Brain Substantia Nigra brain
40 chr2:64190800-64203800 Strong transcription Liver Liver
41 chr2:64192000-64204600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
42 chr2:64192400-64207600 Strong transcription HepG2 liver
43 chr2:64192800-64203000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr2:64194000-64243200 Weak transcription NHLF lung
45 chr2:64195600-64202800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr2:64196200-64205600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr2:64196400-64212400 Weak transcription Colonic Mucosa Colon
48 chr2:64196600-64205000 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr2:64197000-64204600 Weak transcription GM12878-XiMat blood
50 chr2:64197600-64209200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015