Variant report

Variant	rs6549342
Chromosome Location	chr3:70604668-70604669
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs13066991	0.85[EUR][1000 genomes]
rs1491602	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs35071663	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs35751372	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs35807064	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6786654	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs957343	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs957344	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:70600000-70607200	Weak transcription	Gastric	stomach
2	chr3:70603400-70605600	Enhancers	Osteobl	bone
3	chr3:70603800-70604800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr3:70603800-70607200	Weak transcription	ES-I3 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links