The 2.0 version of rSNPBase

Variant report

Variant rs6560513
Chromosome Location chr9:79011666-79011667
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:79010200-79017000 Weak transcription NH-A brain
2 chr9:79010400-79014800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr9:79010600-79011800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr9:79010600-79012000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr9:79010600-79015200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr9:79010600-79015200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr9:79010600-79015200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr9:79010600-79015200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr9:79010600-79015200 Weak transcription Placenta Placenta
10 chr9:79010600-79015400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr9:79010600-79015400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr9:79010600-79015400 Weak transcription HMEC breast
13 chr9:79010600-79016600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr9:79010600-79016600 Weak transcription NHLF lung
15 chr9:79010600-79017000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr9:79010600-79017000 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr9:79010600-79018000 Weak transcription HUVEC blood vessel
18 chr9:79010600-79018400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr9:79010600-79019400 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr9:79010800-79014800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr9:79010800-79015000 Weak transcription GM12878-XiMat blood
22 chr9:79010800-79015400 Weak transcription A549 lung
23 chr9:79010800-79018400 Weak transcription Primary T helper cells fromperipheralblood blood
24 chr9:79010800-79018400 Weak transcription Primary T killer naive cells fromperipheralblood blood
25 chr9:79010800-79018400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr9:79010800-79018400 Weak transcription NHDF-Ad bronchial
27 chr9:79011000-79011800 Weak transcription Fetal Intestine Large intestine
28 chr9:79011000-79015000 Weak transcription Hela-S3 cervix
29 chr9:79011000-79015200 Weak transcription HepG2 liver
30 chr9:79011000-79018400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr9:79011000-79018400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr9:79011000-79018400 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr9:79011200-79015200 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr9:79011200-79015200 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr9:79011200-79018000 Weak transcription Monocytes-CD14+_RO01746 blood
36 chr9:79011200-79018400 Weak transcription Primary monocytes fromperipheralblood blood
37 chr9:79011400-79016800 Weak transcription Fetal Intestine Small intestine
38 chr9:79011600-79011800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015