Variant report
Variant | rs6573741 |
---|---|
Chromosome Location | chr14:67447722-67447723 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:2 , 50 per page) page:
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No data |
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rs_ID | r2[population] |
---|---|
rs10047902 | 0.84[ASN][1000 genomes] |
rs10047906 | 0.82[AMR][1000 genomes];0.86[ASN][1000 genomes] |
rs10130604 | 0.83[ASN][1000 genomes] |
rs10131242 | 0.94[AFR][1000 genomes];0.81[AMR][1000 genomes];0.88[ASN][1000 genomes] |
rs10132565 | 0.94[ASN][1000 genomes] |
rs10132625 | 0.81[ASN][1000 genomes] |
rs10133107 | 0.85[ASN][1000 genomes] |
rs10135100 | 0.90[ASN][1000 genomes] |
rs10135117 | 0.88[ASN][1000 genomes] |
rs10135674 | 0.84[ASN][1000 genomes] |
rs10135701 | 0.93[ASN][1000 genomes] |
rs10136026 | 0.94[ASN][1000 genomes] |
rs10136043 | 0.95[ASN][1000 genomes] |
rs10136073 | 0.85[ASN][1000 genomes] |
rs10136344 | 0.94[ASN][1000 genomes] |
rs10136622 | 0.84[ASN][1000 genomes] |
rs10137618 | 0.88[ASN][1000 genomes] |
rs10138631 | 0.94[AFR][1000 genomes];0.81[AMR][1000 genomes];0.88[ASN][1000 genomes] |
rs10138952 | 0.88[ASN][1000 genomes] |
rs10140569 | 0.92[ASN][1000 genomes] |
rs10141815 | 0.89[ASN][1000 genomes] |
rs10141947 | 0.87[ASN][1000 genomes] |
rs10142059 | 0.84[ASN][1000 genomes] |
rs10142152 | 0.89[ASN][1000 genomes] |
rs10142176 | 0.86[ASN][1000 genomes] |
rs10142878 | 0.93[ASN][1000 genomes] |
rs10144915 | 0.85[ASN][1000 genomes] |
rs10146304 | 0.88[ASN][1000 genomes] |
rs10147954 | 0.93[ASN][1000 genomes] |
rs10148117 | 0.96[ASN][1000 genomes] |
rs10149600 | 0.86[ASN][1000 genomes] |
rs10149760 | 0.84[ASN][1000 genomes] |
rs10150098 | 0.82[AMR][1000 genomes];0.97[ASN][1000 genomes] |
rs10150145 | 0.88[ASN][1000 genomes] |
rs10150424 | 0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs10151107 | 0.80[ASN][1000 genomes] |
rs10151405 | 0.93[ASN][1000 genomes] |
rs10151487 | 0.83[AMR][1000 genomes];0.92[ASN][1000 genomes] |
rs10220477 | 0.91[ASN][1000 genomes] |
rs10483793 | 0.81[ASN][1000 genomes] |
rs1080053 | 0.85[ASN][1000 genomes] |
rs10873197 | 0.94[ASN][1000 genomes] |
rs10873198 | 0.93[ASN][1000 genomes] |
rs11158649 | 0.94[ASN][1000 genomes] |
rs11158650 | 0.85[ASN][1000 genomes] |
rs11158651 | 0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs11158652 | 0.83[ASN][1000 genomes] |
rs1138802 | 0.90[ASN][1000 genomes] |
rs12587989 | 0.87[ASN][1000 genomes] |
rs12588821 | 0.96[ASN][1000 genomes] |
rs13379445 | 0.87[ASN][1000 genomes] |
rs13379476 | 0.94[ASN][1000 genomes] |
rs13379478 | 0.97[ASN][1000 genomes] |
rs1546940 | 0.86[ASN][1000 genomes] |
rs17247862 | 0.82[AMR][1000 genomes];0.86[ASN][1000 genomes] |
rs1884066 | 0.97[ASN][1000 genomes] |
rs1950281 | 0.92[ASN][1000 genomes] |
rs1950282 | 0.86[ASN][1000 genomes] |
rs1950284 | 0.91[AFR][1000 genomes];0.86[ASN][1000 genomes] |
rs1950689 | 0.81[ASN][1000 genomes] |
rs1955604 | 0.94[ASN][1000 genomes] |
rs1955606 | 0.85[ASN][1000 genomes] |
rs1955608 | 0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs1955609 | 0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs1955610 | 0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs1957297 | 0.82[ASN][1000 genomes] |
rs2013137 | 0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs2038398 | 0.82[AMR][1000 genomes];0.94[ASN][1000 genomes] |
rs2064489 | 0.85[ASN][1000 genomes] |
rs2144909 | 0.86[ASN][1000 genomes] |
rs2319549 | 0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs28398007 | 0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs28444104 | 0.85[ASN][1000 genomes] |
rs28539317 | 0.86[ASN][1000 genomes] |
rs28662990 | 0.83[ASN][1000 genomes] |
rs28668670 | 0.81[ASN][1000 genomes] |
rs28673894 | 0.84[ASN][1000 genomes] |
rs28685619 | 0.94[AFR][1000 genomes];0.81[AMR][1000 genomes];0.88[ASN][1000 genomes] |
rs28718312 | 0.89[ASN][1000 genomes] |
rs28762177 | 0.84[ASN][1000 genomes] |
rs28817965 | 0.94[ASN][1000 genomes] |
rs28828116 | 0.84[ASN][1000 genomes] |
rs28850894 | 0.93[ASN][1000 genomes] |
rs3752993 | 0.90[ASN][1000 genomes] |
rs3784074 | 0.85[ASN][1000 genomes] |
rs3784075 | 0.86[ASN][1000 genomes] |
rs4141702 | 0.85[ASN][1000 genomes] |
rs4141703 | 0.87[ASN][1000 genomes] |
rs56094582 | 0.82[ASN][1000 genomes] |
rs56189117 | 0.81[ASN][1000 genomes] |
rs58367317 | 0.88[ASN][1000 genomes] |
rs59774616 | 0.89[ASN][1000 genomes] |
rs60550390 | 0.84[AFR][1000 genomes];0.94[ASN][1000 genomes] |
rs60656960 | 0.89[ASN][1000 genomes] |
rs61386326 | 0.84[ASN][1000 genomes] |
rs6573726 | 0.84[ASN][1000 genomes] |
rs6573727 | 0.85[ASN][1000 genomes] |
rs6573728 | 0.84[ASN][1000 genomes] |
rs6573729 | 0.82[AMR][1000 genomes];0.86[ASN][1000 genomes] |
rs6573732 | 0.85[ASN][1000 genomes] |
rs6573733 | 0.85[ASN][1000 genomes] |
rs6573734 | 0.88[ASN][1000 genomes] |
rs6573735 | 0.83[AMR][1000 genomes];0.92[ASN][1000 genomes] |
rs6573736 | 0.90[ASN][1000 genomes] |
rs6573737 | 0.82[AMR][1000 genomes];0.92[ASN][1000 genomes] |
rs6573740 | 0.97[ASN][1000 genomes] |
rs6573742 | 0.89[AFR][1000 genomes];0.93[ASN][1000 genomes] |
rs6573743 | 0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs6573744 | 0.94[AFR][1000 genomes];0.81[AMR][1000 genomes];0.88[ASN][1000 genomes] |
rs6573745 | 0.85[ASN][1000 genomes] |
rs6573746 | 0.87[ASN][1000 genomes] |
rs6573747 | 0.87[ASN][1000 genomes] |
rs6573748 | 0.86[ASN][1000 genomes] |
rs6573749 | 0.90[ASN][1000 genomes] |
rs6573750 | 0.89[ASN][1000 genomes] |
rs6573751 | 0.84[ASN][1000 genomes] |
rs68178754 | 0.92[ASN][1000 genomes] |
rs7141519 | 0.88[ASN][1000 genomes] |
rs7142068 | 0.95[ASN][1000 genomes] |
rs7144434 | 0.88[ASN][1000 genomes] |
rs7144580 | 0.91[AFR][1000 genomes];0.81[AMR][1000 genomes];0.88[ASN][1000 genomes] |
rs7145005 | 0.86[ASN][1000 genomes] |
rs7145226 | 0.81[ASN][1000 genomes] |
rs7145295 | 0.85[ASN][1000 genomes] |
rs7145718 | 0.85[ASN][1000 genomes] |
rs7145844 | 0.88[ASN][1000 genomes] |
rs7145917 | 0.89[ASN][1000 genomes] |
rs7146098 | 0.83[AMR][1000 genomes];0.92[ASN][1000 genomes] |
rs7146635 | 0.92[ASN][1000 genomes] |
rs7147570 | 0.92[ASN][1000 genomes] |
rs7147943 | 0.84[ASN][1000 genomes] |
rs7148911 | 0.87[ASN][1000 genomes] |
rs7149711 | 0.81[ASN][1000 genomes] |
rs7149905 | 0.85[ASN][1000 genomes] |
rs7150131 | 0.81[ASN][1000 genomes] |
rs7150739 | 0.88[ASN][1000 genomes] |
rs7151086 | 0.87[ASN][1000 genomes] |
rs7152001 | 0.93[ASN][1000 genomes] |
rs7152422 | 0.92[ASN][1000 genomes] |
rs7153936 | 0.84[ASN][1000 genomes] |
rs7155042 | 0.90[ASN][1000 genomes] |
rs7156081 | 0.82[AMR][1000 genomes];0.94[ASN][1000 genomes] |
rs7156655 | 0.85[ASN][1000 genomes] |
rs7156852 | 0.81[ASN][1000 genomes] |
rs7157126 | 0.86[ASN][1000 genomes] |
rs7158760 | 0.83[ASN][1000 genomes] |
rs7159871 | 0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs7160476 | 0.87[ASN][1000 genomes] |
rs7161664 | 0.88[ASN][1000 genomes] |
rs7161698 | 0.91[ASN][1000 genomes] |
rs723432 | 0.90[ASN][1000 genomes] |
rs728647 | 0.90[ASN][1000 genomes] |
rs73274960 | 0.88[ASN][1000 genomes] |
rs768770 | 0.83[ASN][1000 genomes] |
rs8003434 | 0.82[ASN][1000 genomes] |
rs8003929 | 0.87[ASN][1000 genomes] |
rs8005668 | 0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs8006067 | 0.87[ASN][1000 genomes] |
rs8006552 | 0.81[ASN][1000 genomes] |
rs8006669 | 0.82[ASN][1000 genomes] |
rs8008739 | 0.92[ASN][1000 genomes] |
rs8008773 | 0.82[ASN][1000 genomes] |
rs8009087 | 0.81[ASN][1000 genomes] |
rs8012063 | 0.94[ASN][1000 genomes] |
rs8012660 | 0.85[ASN][1000 genomes] |
rs8012944 | 0.82[AMR][1000 genomes];0.88[ASN][1000 genomes] |
rs8013401 | 0.97[ASN][1000 genomes] |
rs8013724 | 0.83[ASN][1000 genomes] |
rs8013943 | 0.92[ASN][1000 genomes] |
rs8014841 | 0.84[ASN][1000 genomes] |
rs8016186 | 0.85[ASN][1000 genomes] |
rs8016391 | 0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs8016725 | 0.92[ASN][1000 genomes] |
rs8018545 | 0.81[ASN][1000 genomes] |
rs8018750 | 0.93[ASN][1000 genomes] |
rs8018920 | 0.85[ASN][1000 genomes] |
rs8019510 | 0.88[ASN][1000 genomes] |
rs8020095 | 0.96[ASN][1000 genomes] |
rs8020144 | 0.83[ASN][1000 genomes] |
rs8021044 | 0.81[AMR][1000 genomes];0.94[ASN][1000 genomes] |
rs8021098 | 0.84[ASN][1000 genomes] |
rs8021795 | 0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs8022437 | 0.82[AMR][1000 genomes];0.86[ASN][1000 genomes] |
rs8022657 | 0.92[ASN][1000 genomes] |
rs9323485 | 0.81[ASN][1000 genomes] |
rs9323486 | 0.81[AMR][1000 genomes];0.85[ASN][1000 genomes] |
rs9323488 | 0.83[ASN][1000 genomes] |
rs9323489 | 0.84[ASN][1000 genomes] |
rs9323490 | 0.88[ASN][1000 genomes] |
rs9323491 | 0.88[ASN][1000 genomes] |
rs9323492 | 0.88[ASN][1000 genomes] |
rs9323493 | 0.85[ASN][1000 genomes] |
rs9671368 | 0.82[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv3385263 | chr14:66514718-67511481 | ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Active TSS Bivalent Enhancer Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 33 gene(s) | inside rSNPs | diseases |
2 | nsv525460 | chr14:66851185-67626594 | Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 19 gene(s) | inside rSNPs | diseases |
3 | esv1834170 | chr14:67103140-67527235 | Weak transcription Enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
4 | esv2829998 | chr14:67103579-67626594 | Weak transcription Strong transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
5 | esv1838724 | chr14:67232573-67527235 | Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Strong transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
6 | esv2763071 | chr14:67284476-67597237 | Strong transcription Weak transcription ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
7 | nsv902058 | chr14:67310195-67760538 | Flanking Active TSS Enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 19 gene(s) | inside rSNPs | diseases |
8 | nsv902059 | chr14:67352226-67760538 | ZNF genes & repeats Strong transcription Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 19 gene(s) | inside rSNPs | diseases |
9 | esv2751285 | chr14:67364747-67886781 | Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 41 gene(s) | inside rSNPs | diseases |
10 | nsv902060 | chr14:67417083-67760538 | Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 19 gene(s) | inside rSNPs | diseases |
11 | nsv902061 | chr14:67418872-67482629 | Strong transcription Weak transcription ZNF genes & repeats Enhancers | TF binding regionChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
12 | nsv564958 | chr14:67429672-67453393 | Enhancers Weak transcription Strong transcription ZNF genes & repeats | TF binding regionChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
13 | nsv902062 | chr14:67429672-67481044 | Weak transcription Strong transcription Enhancers ZNF genes & repeats | TF binding regionChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
14 | esv1841498 | chr14:67434470-67634318 | Strong transcription Weak transcription ZNF genes & repeats Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Genic enhancers Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
15 | nsv564959 | chr14:67435182-67456086 | Weak transcription Strong transcription Enhancers ZNF genes & repeats | TF binding regionChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
16 | nsv902063 | chr14:67435567-67459554 | ZNF genes & repeats Strong transcription Weak transcription Enhancers | TF binding regionChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
17 | nsv902064 | chr14:67441407-67485640 | Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS | TF binding regionChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr14:67414800-67480000 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
2 | chr14:67415600-67486400 | Weak transcription | Pancreas | Pancrea |
3 | chr14:67416400-67491200 | Weak transcription | Left Ventricle | heart |
4 | chr14:67418000-67491400 | Weak transcription | Ovary | ovary |
5 | chr14:67424800-67456000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
6 | chr14:67424800-67499000 | Weak transcription | Aorta | Aorta |
7 | chr14:67427000-67460800 | Weak transcription | Duodenum Mucosa | Duodenum |
8 | chr14:67427400-67453000 | Weak transcription | Psoas Muscle | Psoas |
9 | chr14:67427600-67464800 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
10 | chr14:67427600-67498800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
11 | chr14:67427800-67459200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
12 | chr14:67428000-67454000 | Weak transcription | Primary hematopoietic stem cells | blood |
13 | chr14:67429800-67469600 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
14 | chr14:67432600-67454600 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
15 | chr14:67438000-67491400 | Weak transcription | Fetal Intestine Small | intestine |
16 | chr14:67446200-67474600 | Weak transcription | Fetal Kidney | kidney |
17 | chr14:67446600-67464200 | Weak transcription | GM12878-XiMat | blood |
18 | chr14:67447000-67450400 | Weak transcription | Liver | Liver |
19 | chr14:67447000-67468600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
20 | chr14:67447200-67490600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |