Variant report

Variant rs6580475
Chromosome Location chr5:146942705-146942706
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:146934200-146945000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr5:146938200-146943000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr5:146938200-146945200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr5:146938400-146944000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr5:146938800-146945200 Weak transcription Placenta Amnion Placenta Amnion
6 chr5:146939200-146945600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
7 chr5:146939200-146945800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr5:146939600-146943000 Weak transcription Brain Germinal Matrix brain
9 chr5:146939600-146945000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr5:146940200-146952200 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr5:146940800-146942800 Weak transcription Fetal Muscle Leg muscle
12 chr5:146940800-146945200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr5:146940800-146946800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr5:146940800-146946800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr5:146942000-146942800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
16 chr5:146942000-146943400 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr5:146942000-146945400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr5:146942200-146944400 Genic enhancers H1 Cell Line embryonic stem cell
19 chr5:146942200-146945600 Genic enhancers HUES6 Cell Line embryonic stem cell
20 chr5:146942400-146942800 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr5:146942400-146944200 Strong transcription HUES64 Cell Line embryonic stem cell
22 chr5:146942400-146944200 Strong transcription iPS-15b Cell Line embryonic stem cell
23 chr5:146942400-146945400 Weak transcription Osteobl bone
24 chr5:146942400-146947000 Genic enhancers iPS-18 Cell Line embryonic stem cell
25 chr5:146942400-146947200 Genic enhancers iPS-20b Cell Line embryonic stem cell
26 chr5:146942600-146943400 Strong transcription H9 Cell Line embryonic stem cell
27 chr5:146942600-146944400 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr5:146942600-146945000 Strong transcription HUES48 Cell Line embryonic stem cell
29 chr5:146942600-146945800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived

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