Variant report

Variant rs6582
Chromosome Location chr15:40845597-40845598
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:40816800-40845600 Weak transcription Ovary ovary
2 chr15:40821400-40848000 Weak transcription Brain Anterior Caudate brain
3 chr15:40821800-40856400 Weak transcription Colon Smooth Muscle Colon
4 chr15:40822600-40856400 Weak transcription Small Intestine intestine
5 chr15:40828000-40856600 Weak transcription Placenta Amnion Placenta Amnion
6 chr15:40829800-40846000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr15:40831600-40856600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr15:40831800-40845800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr15:40832000-40845600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr15:40832000-40845800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr15:40838000-40848200 Weak transcription Rectal Smooth Muscle rectum
12 chr15:40838000-40856400 Weak transcription A549 lung
13 chr15:40838200-40845800 Weak transcription Brain Germinal Matrix brain
14 chr15:40838200-40846600 Strong transcription Fetal Intestine Small intestine
15 chr15:40838600-40847000 Weak transcription Fetal Brain Male brain
16 chr15:40838600-40852800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr15:40838600-40855600 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr15:40838800-40846200 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr15:40838800-40846600 Strong transcription Fetal Stomach stomach
20 chr15:40839000-40845800 Strong transcription Fetal Adrenal Gland Adrenal Gland
21 chr15:40839000-40847200 Weak transcription Brain Angular Gyrus brain
22 chr15:40839200-40845800 Weak transcription Stomach Mucosa stomach
23 chr15:40839200-40848600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr15:40839200-40849000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr15:40839200-40849000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr15:40839200-40849600 Strong transcription Breast Myoepithelial Primary Cells Breast
27 chr15:40839200-40850000 Strong transcription Fetal Thymus thymus
28 chr15:40839400-40846600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr15:40839400-40847800 Weak transcription HUVEC blood vessel
30 chr15:40839400-40849600 Strong transcription HMEC breast
31 chr15:40839400-40850000 Strong transcription Fetal Intestine Large intestine
32 chr15:40839600-40847600 Weak transcription NHDF-Ad bronchial
33 chr15:40839600-40849800 Strong transcription Primary T regulatory cells fromperipheralblood blood
34 chr15:40839800-40848200 Weak transcription HepG2 liver
35 chr15:40840000-40848000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr15:40840000-40856400 Weak transcription Fetal Brain Female brain
37 chr15:40840000-40856600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr15:40840400-40847600 Weak transcription Primary hematopoietic stem cells blood
39 chr15:40840400-40850600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr15:40840600-40846000 Strong transcription Hela-S3 cervix
41 chr15:40840600-40848800 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr15:40841200-40845600 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr15:40841200-40847800 Weak transcription NH-A brain
44 chr15:40841600-40846200 Weak transcription HUES64 Cell Line embryonic stem cell
45 chr15:40841600-40846400 Strong transcription Thymus Thymus
46 chr15:40842000-40849800 Strong transcription Primary neutrophils fromperipheralblood blood
47 chr15:40842000-40849800 Strong transcription Primary T helper cells PMA-I stimulated --
48 chr15:40842000-40849800 Strong transcription Primary T helper cells fromperipheralblood blood
49 chr15:40842400-40847800 Weak transcription Brain Substantia Nigra brain
50 chr15:40842400-40849000 Strong transcription Sigmoid Colon Sigmoid Colon

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