Variant report

Variant	rs6584110
Chromosome Location	chr10:98901122-98901123
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs73322786	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532232	chr10:98360775-99141797	Enhancers Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
2	esv2758236	chr10:98789963-98962472	Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	esv2759777	chr10:98789963-98962472	Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:98880200-98912800	Weak transcription	Thymus	Thymus
2	chr10:98892400-98911400	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr10:98897400-98901200	Enhancers	Fetal Brain Male	brain
4	chr10:98898000-98901400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr10:98898000-98901400	Enhancers	Fetal Lung	lung
6	chr10:98898200-98901400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr10:98898200-98901800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr10:98899400-98901200	Enhancers	Fetal Heart	heart
9	chr10:98899600-98901200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
10	chr10:98899600-98901200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
11	chr10:98899600-98901400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr10:98899600-98901400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr10:98900000-98902200	Enhancers	HepG2	liver
14	chr10:98900200-98901600	Bivalent Enhancer	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
15	chr10:98900400-98901400	Bivalent Enhancer	Primary hematopoietic stem cells short term culture	blood
16	chr10:98900600-98901400	Enhancers	Fetal Brain Female	brain
17	chr10:98900800-98901200	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
18	chr10:98900800-98901200	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
19	chr10:98900800-98901200	Flanking Active TSS	Brain Germinal Matrix	brain
20	chr10:98900800-98901400	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
21	chr10:98900800-98901600	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
22	chr10:98900800-98901600	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
23	chr10:98901000-98907400	Strong transcription	Fetal Thymus	thymus
24	chr10:98901000-98923200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain

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