Variant report

Variant rs6587830
Chromosome Location chr1:59057933-59057934
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59051200-59063400 Weak transcription Primary neutrophils fromperipheralblood blood
2 chr1:59052400-59058000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr1:59054400-59059400 Enhancers Breast Myoepithelial Primary Cells Breast
4 chr1:59055000-59060000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr1:59055200-59058200 Weak transcription Fetal Lung lung
6 chr1:59056000-59059400 Enhancers Pancreas Pancrea
7 chr1:59056400-59058000 Weak transcription Fetal Stomach stomach
8 chr1:59056400-59058200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr1:59056400-59059400 Enhancers HMEC breast
10 chr1:59056800-59058800 Enhancers Aorta Aorta
11 chr1:59056800-59058800 Enhancers Fetal Muscle Leg muscle
12 chr1:59056800-59059400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr1:59057000-59058000 Enhancers NHEK skin
14 chr1:59057000-59058600 Enhancers Fetal Muscle Trunk muscle
15 chr1:59057000-59059600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:59057200-59058000 Enhancers HUVEC blood vessel
17 chr1:59057200-59059200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr1:59057200-59059200 Enhancers Hela-S3 cervix
19 chr1:59057200-59059400 Enhancers NHDF-Ad bronchial
20 chr1:59057200-59059600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
21 chr1:59057400-59058000 Enhancers Muscle Satellite Cultured Cells --
22 chr1:59057400-59058000 Enhancers Esophagus oesophagus
23 chr1:59057400-59058600 Enhancers Right Ventricle heart
24 chr1:59057400-59058800 Enhancers Lung lung
25 chr1:59057400-59058800 Enhancers Rectal Smooth Muscle rectum
26 chr1:59057400-59058800 Enhancers Skeletal Muscle Female skeletal muscle
27 chr1:59057400-59059200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
28 chr1:59057400-59059200 Enhancers Skeletal Muscle Male skeletal muscle
29 chr1:59057400-59059200 Enhancers HSMM muscle
30 chr1:59057400-59059400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:59057400-59059400 Enhancers Ovary ovary
32 chr1:59057600-59058000 Weak transcription Right Atrium heart
33 chr1:59057600-59058200 Enhancers Placenta Placenta
34 chr1:59057600-59058800 Enhancers Fetal Kidney kidney
35 chr1:59057600-59058800 Enhancers Placenta Amnion Placenta Amnion
36 chr1:59057600-59059200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr1:59057600-59059200 Enhancers Osteobl bone
38 chr1:59057800-59058200 Flanking Active TSS Stomach Smooth Muscle stomach
39 chr1:59057800-59058400 Enhancers Gastric stomach
40 chr1:59057800-59058400 Flanking Active TSS HSMMtube muscle
41 chr1:59057800-59058600 Weak transcription A549 lung
42 chr1:59057800-59058800 Enhancers ES-I3 Cell Line embryonic stem cell
43 chr1:59057800-59058800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
44 chr1:59057800-59058800 Enhancers Colon Smooth Muscle Colon
45 chr1:59057800-59058800 Enhancers Duodenum Smooth Muscle Duodenum
46 chr1:59057800-59058800 Enhancers Left Ventricle heart
47 chr1:59057800-59058800 Enhancers Psoas Muscle Psoas
48 chr1:59057800-59058800 Enhancers Spleen Spleen
49 chr1:59057800-59059000 Enhancers NH-A brain
50 chr1:59057800-59059600 Enhancers NHLF lung

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