Variant report

Variant rs6596865
Chromosome Location chr6:253428-253429
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:28 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:236800-255400 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr6:250600-258400 Enhancers Primary monocytes fromperipheralblood blood
3 chr6:251000-254800 Weak transcription Primary B cells from cord blood blood
4 chr6:251200-255400 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr6:251200-257200 Weak transcription Primary T helper cells fromperipheralblood blood
6 chr6:251200-259400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr6:251400-255400 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr6:251800-253600 Enhancers Primary T regulatory cells fromperipheralblood blood
9 chr6:251800-254000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr6:252000-254600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr6:252200-253600 Enhancers Primary hematopoietic stem cells short term culture blood
12 chr6:252200-253800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr6:252600-254000 Enhancers Hela-S3 cervix
14 chr6:252600-254600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr6:252600-257400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr6:252800-257400 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr6:253000-253600 Enhancers Primary neutrophils fromperipheralblood blood
18 chr6:253200-253800 Enhancers Monocytes-CD14+_RO01746 blood
19 chr6:253200-254400 Enhancers Primary T cells fromperipheralblood blood
20 chr6:253200-254400 Enhancers Primary Natural Killer cells fromperipheralblood blood
21 chr6:253400-255000 Weak transcription Primary B cells from peripheral blood blood
22 chr6:253400-256200 Weak transcription Primary T cells from cord blood blood
23 chr6:253400-256200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr6:253400-256600 Weak transcription Primary hematopoietic stem cells blood
25 chr6:253400-256800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr6:253400-257000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr6:253400-257000 Weak transcription NHEK skin
28 chr6:253400-257200 Enhancers GM12878-XiMat blood

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