Variant report

Variant	rs6615320
Chromosome Location	chrX:91350161-91350162
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs3908421	1.00[CEU][hapmap];0.93[JPT][hapmap]
rs4893165	0.92[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap]
rs5984857	1.00[CEU][hapmap];0.92[JPT][hapmap]
rs5984873	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432350	chrX:91158935-91590765	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:91346000-91355600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chrX:91347600-91354400	Weak transcription	HUES6 Cell Line	embryonic stem cell
3	chrX:91348200-91354600	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chrX:91348200-91355600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chrX:91348200-91355800	Weak transcription	HUES64 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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