Variant report
| Variant | rs6621945 |
|---|---|
| Chromosome Location | chrX:104465173-104465174 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:11)
| rs_ID | r2[population] |
|---|---|
| rs12397034 | 1.00[TSI][hapmap] |
| rs16984753 | 1.00[GIH][hapmap] |
| rs16984759 | 1.00[GIH][hapmap] |
| rs16984763 | 1.00[GIH][hapmap] |
| rs2213327 | 1.00[TSI][hapmap] |
| rs2392688 | 1.00[TSI][hapmap] |
| rs5962281 | 1.00[GIH][hapmap] |
| rs5962471 | 1.00[MEX][hapmap] |
| rs5962477 | 1.00[TSI][hapmap] |
| rs7063177 | 1.00[TSI][hapmap] |
| rs736637 | 1.00[TSI][hapmap] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv432352 | chrX:104346855-104831855 | Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
