The 2.0 version of rSNPBase

Variant report

Variant rs664072
Chromosome Location chr1:210422160-210422161
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:210407800-210424000 Weak transcription Colonic Mucosa Colon
2 chr1:210407800-210424000 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:210407800-210424200 Weak transcription Pancreas Pancrea
4 chr1:210408000-210424000 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr1:210410800-210424000 Weak transcription Lung lung
6 chr1:210410800-210424200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr1:210411200-210423600 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr1:210411400-210423800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr1:210411800-210422200 Weak transcription Fetal Muscle Trunk muscle
10 chr1:210411800-210423600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr1:210411800-210423600 Weak transcription Brain Anterior Caudate brain
12 chr1:210411800-210423800 Weak transcription Brain Inferior Temporal Lobe brain
13 chr1:210412000-210422800 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr1:210412000-210423800 Weak transcription Brain Angular Gyrus brain
15 chr1:210414000-210424000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:210414000-210424200 Weak transcription Aorta Aorta
17 chr1:210414000-210424400 Weak transcription Ovary ovary
18 chr1:210414400-210424000 Weak transcription NHEK skin
19 chr1:210414800-210423800 Weak transcription Rectal Smooth Muscle rectum
20 chr1:210415000-210424000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr1:210415200-210423800 Weak transcription Colon Smooth Muscle Colon
22 chr1:210415400-210423800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr1:210415600-210422800 Weak transcription Fetal Stomach stomach
24 chr1:210415600-210423200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr1:210415800-210424000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr1:210416200-210424000 Weak transcription Stomach Smooth Muscle stomach
27 chr1:210418600-210423200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr1:210418600-210423800 Weak transcription NHDF-Ad bronchial
29 chr1:210418800-210423600 Weak transcription HMEC breast
30 chr1:210420000-210423800 Weak transcription H9 Cell Line embryonic stem cell
31 chr1:210420000-210423800 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr1:210420200-210422800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr1:210420200-210424200 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr1:210420400-210424000 Weak transcription Fetal Brain Male brain
35 chr1:210420600-210423600 Weak transcription HUVEC blood vessel
36 chr1:210420600-210423800 Weak transcription HSMM muscle
37 chr1:210420800-210423200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr1:210421400-210422200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
39 chr1:210421400-210422400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
40 chr1:210421400-210423600 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr1:210421400-210424000 Weak transcription Thymus Thymus
42 chr1:210421600-210422200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr1:210421600-210422200 Enhancers Muscle Satellite Cultured Cells --
44 chr1:210421600-210423600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015