The 2.0 version of rSNPBase

Variant report

Variant rs66484704
Chromosome Location chr2:9795776-9795777
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:9789400-9796600 Weak transcription Gastric stomach
2 chr2:9789400-9797600 Weak transcription iPS-18 Cell Line embryonic stem cell
3 chr2:9789600-9795800 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr2:9789600-9796400 Weak transcription HUES64 Cell Line embryonic stem cell
5 chr2:9790800-9797400 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr2:9790800-9799200 Weak transcription H1 Cell Line embryonic stem cell
7 chr2:9790800-9801000 Weak transcription HUES6 Cell Line embryonic stem cell
8 chr2:9792800-9801600 Weak transcription Spleen Spleen
9 chr2:9794000-9796800 Enhancers Brain Substantia Nigra brain
10 chr2:9794200-9797200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
11 chr2:9794200-9799400 Enhancers HMEC breast
12 chr2:9794400-9796600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr2:9794400-9797600 Enhancers Primary T cells fromperipheralblood blood
14 chr2:9794400-9797600 Enhancers Primary T helper 17 cells PMA-I stimulated --
15 chr2:9794400-9797600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr2:9794400-9797600 Enhancers Placenta Amnion Placenta Amnion
17 chr2:9794400-9797600 Enhancers NHEK skin
18 chr2:9794400-9798000 Enhancers NHLF lung
19 chr2:9794400-9799600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr2:9794400-9800400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr2:9794600-9796000 Enhancers NH-A brain
22 chr2:9794600-9796800 Enhancers K562 blood
23 chr2:9794600-9798400 Enhancers NHDF-Ad bronchial
24 chr2:9794600-9799600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
25 chr2:9794800-9797000 Weak transcription Ovary ovary
26 chr2:9794800-9797400 Enhancers Primary Natural Killer cells fromperipheralblood blood
27 chr2:9794800-9797800 Enhancers HUVEC blood vessel
28 chr2:9794800-9799000 Weak transcription Placenta Placenta
29 chr2:9794800-9800400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr2:9795000-9796600 Weak transcription Brain Inferior Temporal Lobe brain
31 chr2:9795000-9797400 Enhancers Primary T killer naive cells fromperipheralblood blood
32 chr2:9795000-9798000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr2:9795000-9798600 Weak transcription Fetal Muscle Trunk muscle
34 chr2:9795000-9799200 Enhancers Osteobl bone
35 chr2:9795200-9795800 Weak transcription Brain Cingulate Gyrus brain
36 chr2:9795200-9796200 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr2:9795200-9796400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
38 chr2:9795200-9796600 Weak transcription Brain Angular Gyrus brain
39 chr2:9795200-9796600 Weak transcription Brain Hippocampus Middle brain
40 chr2:9795200-9798000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
41 chr2:9795400-9796000 Enhancers Primary T helper naive cells from peripheral blood blood
42 chr2:9795400-9796200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr2:9795400-9796200 Flanking Active TSS Hela-S3 cervix
44 chr2:9795400-9796400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
45 chr2:9795400-9796400 Flanking Active TSS GM12878-XiMat blood
46 chr2:9795400-9796800 Enhancers Primary T helper cells fromperipheralblood blood
47 chr2:9795400-9797000 Enhancers Primary T killer memory cells from peripheral blood blood
48 chr2:9795400-9797000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr2:9795400-9797200 Bivalent Enhancer HepG2 liver
50 chr2:9795400-9798000 Flanking Active TSS A549 lung

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Last update: Aug 31, 2015