Variant report

Variant	rs6660643
Chromosome Location	chr1:214732144-214732145
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:214722211..214723864-chr1:214731455..214733732,2	K562	blood:
2	chr1:214730154..214732563-chr1:214752953..214754517,2	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs12142746	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3806315	0.94[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4311856	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:214727200-214732400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr1:214727200-214732600	Weak transcription	Fetal Kidney	kidney
3	chr1:214730200-214733400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr1:214730800-214732200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr1:214730800-214732200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr1:214730800-214732800	Enhancers	HSMM	muscle
7	chr1:214731000-214732800	Enhancers	NH-A	brain
8	chr1:214731000-214732800	Enhancers	NHLF	lung
9	chr1:214731000-214732800	Enhancers	Osteobl	bone
10	chr1:214731200-214732200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr1:214731200-214732200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr1:214731200-214732400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr1:214731200-214732600	Enhancers	Hela-S3	cervix
14	chr1:214731200-214732800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr1:214731200-214733000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr1:214731200-214733000	Enhancers	NHDF-Ad	bronchial
17	chr1:214731400-214732200	Enhancers	Primary hematopoietic stem cells short term culture	blood
18	chr1:214731400-214732200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
19	chr1:214731800-214732800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr1:214731800-214732800	Enhancers	A549	lung
21	chr1:214731800-214733000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr1:214731800-214733000	Enhancers	Muscle Satellite Cultured Cells	--
23	chr1:214731800-214735000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
24	chr1:214732000-214733000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
25	chr1:214732000-214737200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
26	chr1:214732000-214739400	Weak transcription	NHEK	skin
27	chr1:214732000-214739800	Weak transcription	HMEC	breast
28	chr1:214732000-214740200	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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