The 2.0 version of rSNPBase

Variant report

Variant rs66630638
Chromosome Location chr4:56231728-56231729
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:56213400-56233600 Weak transcription Fetal Intestine Large intestine
2 chr4:56213600-56242600 Weak transcription Gastric stomach
3 chr4:56213800-56231800 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr4:56213800-56233600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr4:56213800-56239000 Weak transcription Brain Germinal Matrix brain
6 chr4:56213800-56251400 Weak transcription Pancreas Pancrea
7 chr4:56214000-56237800 Weak transcription Primary T cells fromperipheralblood blood
8 chr4:56214000-56241800 Weak transcription Colonic Mucosa Colon
9 chr4:56214400-56247600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr4:56215000-56235400 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr4:56219400-56238400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr4:56220800-56241400 Weak transcription Primary T cells from cord blood blood
13 chr4:56225600-56235400 Weak transcription Right Ventricle heart
14 chr4:56225600-56237800 Weak transcription Primary B cells from peripheral blood blood
15 chr4:56225800-56233000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr4:56225800-56235600 Weak transcription Aorta Aorta
17 chr4:56225800-56236800 Weak transcription Colon Smooth Muscle Colon
18 chr4:56225800-56237400 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr4:56225800-56238400 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr4:56225800-56244800 Weak transcription Duodenum Mucosa Duodenum
21 chr4:56225800-56244800 Weak transcription Stomach Mucosa stomach
22 chr4:56226000-56233200 Weak transcription Stomach Smooth Muscle stomach
23 chr4:56226000-56233800 Weak transcription Left Ventricle heart
24 chr4:56226000-56234400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr4:56226000-56236000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr4:56226000-56237200 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr4:56226000-56238400 Weak transcription Osteobl bone
28 chr4:56226000-56238600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr4:56226000-56240400 Weak transcription HSMM muscle
30 chr4:56226000-56241200 Weak transcription Esophagus oesophagus
31 chr4:56226000-56245000 Weak transcription Muscle Satellite Cultured Cells --
32 chr4:56226000-56245000 Weak transcription HSMMtube muscle
33 chr4:56227600-56233000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr4:56227800-56238400 Weak transcription Placenta Placenta
35 chr4:56228000-56244800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr4:56228400-56234400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr4:56228400-56245400 Weak transcription K562 blood
38 chr4:56228400-56251000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr4:56229400-56232000 Weak transcription Placenta Amnion Placenta Amnion
40 chr4:56229400-56237200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr4:56229600-56233400 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr4:56229800-56231800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr4:56229800-56231800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr4:56229800-56231800 Strong transcription Liver Liver
45 chr4:56229800-56231800 Strong transcription Thymus Thymus
46 chr4:56229800-56232200 Strong transcription Breast Myoepithelial Primary Cells Breast
47 chr4:56229800-56234200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
48 chr4:56229800-56236800 Strong transcription Dnd41 blood
49 chr4:56229800-56237000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr4:56229800-56237000 Strong transcription Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015