The 2.0 version of rSNPBase

Variant report

Variant rs66661132
Chromosome Location chr19:19262997-19262998
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19249400-19271200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr19:19249600-19271800 Weak transcription Brain Substantia Nigra brain
3 chr19:19249600-19282600 Weak transcription NHLF lung
4 chr19:19249800-19269000 Weak transcription Brain Angular Gyrus brain
5 chr19:19249800-19271200 Weak transcription Primary hematopoietic stem cells blood
6 chr19:19249800-19280600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr19:19250000-19266800 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr19:19250600-19271800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr19:19252800-19272400 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr19:19253600-19265600 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr19:19257000-19263000 Weak transcription H1 Cell Line embryonic stem cell
12 chr19:19257000-19266600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr19:19257000-19271200 Weak transcription Muscle Satellite Cultured Cells --
14 chr19:19257000-19271600 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr19:19257000-19280400 Weak transcription Gastric stomach
16 chr19:19257000-19280400 Weak transcription Pancreas Pancrea
17 chr19:19257400-19266400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr19:19257400-19269000 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr19:19257800-19270000 Weak transcription Osteobl bone
20 chr19:19257800-19270400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr19:19258000-19267800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr19:19258400-19280600 Weak transcription Right Ventricle heart
23 chr19:19258600-19273000 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr19:19258800-19272600 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr19:19258800-19280400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr19:19259000-19266800 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr19:19259000-19290200 Weak transcription Colon Smooth Muscle Colon
28 chr19:19259200-19263800 Weak transcription HSMMtube muscle
29 chr19:19259200-19267000 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr19:19259400-19268200 Weak transcription Rectal Smooth Muscle rectum
31 chr19:19260200-19271600 Weak transcription Primary T cells fromperipheralblood blood
32 chr19:19260200-19280600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr19:19260200-19280600 Weak transcription Brain Hippocampus Middle brain
34 chr19:19260400-19263600 Weak transcription Fetal Muscle Leg muscle
35 chr19:19260400-19266200 Weak transcription Aorta Aorta
36 chr19:19260400-19266200 Weak transcription Monocytes-CD14+_RO01746 blood
37 chr19:19260400-19267200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr19:19260400-19267400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr19:19260400-19267600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr19:19260400-19269400 Weak transcription Brain Cingulate Gyrus brain
41 chr19:19260400-19280800 Weak transcription Ovary ovary
42 chr19:19260600-19263600 Weak transcription Fetal Muscle Trunk muscle
43 chr19:19260600-19265800 Weak transcription Primary T regulatory cells fromperipheralblood blood
44 chr19:19260600-19266200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr19:19260600-19266200 Weak transcription Fetal Intestine Large intestine
46 chr19:19260600-19266200 Weak transcription Fetal Lung lung
47 chr19:19260600-19266200 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr19:19260600-19266400 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr19:19260600-19266600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr19:19260600-19266800 Weak transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015