Variant report

Variant rs66661587
Chromosome Location chr12:9559407-9559408
allele A/C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:9544800-9593200 Weak transcription H9 Cell Line embryonic stem cell
2 chr12:9545400-9573800 Weak transcription Fetal Intestine Small intestine
3 chr12:9545400-9575600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr12:9549400-9564000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr12:9557400-9564200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr12:9557600-9559800 Enhancers Fetal Brain Male brain
7 chr12:9557600-9564200 Weak transcription Dnd41 blood
8 chr12:9557600-9572200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr12:9557800-9571400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr12:9558200-9560000 Active TSS Right Ventricle heart
11 chr12:9558400-9559600 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
12 chr12:9558400-9559600 Active TSS Breast Myoepithelial Primary Cells Breast
13 chr12:9558400-9559600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
14 chr12:9558400-9559600 ZNF genes & repeats Fetal Thymus thymus
15 chr12:9558600-9559600 Active TSS Brain Hippocampus Middle brain
16 chr12:9558600-9559600 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
17 chr12:9558600-9559600 Transcr. at gene 5' and 3' Fetal Muscle Trunk muscle
18 chr12:9558600-9559800 Active TSS Fetal Brain Female brain
19 chr12:9558600-9559800 Active TSS Stomach Smooth Muscle stomach
20 chr12:9558600-9560000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
21 chr12:9558800-9559600 Active TSS ES-WA7 Cell Line embryonic stem cell
22 chr12:9558800-9559600 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr12:9558800-9559600 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
24 chr12:9558800-9559600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
25 chr12:9558800-9559800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr12:9558800-9559800 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin03 Skin
27 chr12:9558800-9559800 Active TSS Brain Anterior Caudate brain
28 chr12:9558800-9559800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
29 chr12:9558800-9560000 Active TSS HUES64 Cell Line embryonic stem cell
30 chr12:9558800-9560000 Active TSS Psoas Muscle Psoas
31 chr12:9558800-9560200 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr12:9558800-9560200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr12:9558800-9560200 Active TSS Adipose Nuclei Adipose
34 chr12:9558800-9566600 Weak transcription Primary hematopoietic stem cells blood
35 chr12:9559000-9559600 Active TSS iPS-20b Cell Line embryonic stem cell
36 chr12:9559000-9559600 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
37 chr12:9559000-9559600 Active TSS Skeletal Muscle Male skeletal muscle
38 chr12:9559000-9559800 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
39 chr12:9559000-9559800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr12:9559000-9559800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
41 chr12:9559000-9559800 Active TSS Brain Cingulate Gyrus brain
42 chr12:9559000-9565800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr12:9559200-9559600 Active TSS HUES48 Cell Line embryonic stem cell
44 chr12:9559200-9559800 Enhancers H1 Cell Line embryonic stem cell
45 chr12:9559200-9559800 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin01 Skin
46 chr12:9559200-9560200 Active TSS Pancreatic Islets Pancreatic Islet
47 chr12:9559200-9560400 Enhancers Cortex derived primary cultured neurospheres brain
48 chr12:9559200-9564600 Weak transcription Primary T cells fromperipheralblood blood
49 chr12:9559200-9571000 Weak transcription Thymus Thymus
50 chr12:9559200-9599600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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