Variant report

Variant	rs6667492
Chromosome Location	chr1:197902814-197902815
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10801633	0.83[GIH][hapmap];0.91[TSI][hapmap];0.84[EUR][1000 genomes]
rs10922332	0.83[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.89[ASN][1000 genomes]
rs10922338	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12029707	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12142428	0.83[EUR][1000 genomes]
rs2047539	0.80[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2088651	0.85[ASN][1000 genomes]
rs413713	0.86[CHD][hapmap];0.91[JPT][hapmap];0.88[MEX][hapmap]
rs4915135	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4915136	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6671069	0.81[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs6699938	0.83[GIH][hapmap];0.83[MEX][hapmap];0.91[TSI][hapmap];0.84[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:197902800-197903000	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr1:197902800-197903200	Enhancers	Dnd41	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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