The 2.0 version of rSNPBase

Variant report

Variant rs6669439
Chromosome Location chr1:211967583-211967584
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211912800-211970200 Weak transcription HMEC breast
2 chr1:211913800-211967800 Weak transcription Primary T helper naive cells fromperipheralblood blood
3 chr1:211913800-211968800 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr1:211913800-211969600 Weak transcription Small Intestine intestine
5 chr1:211914000-211973600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr1:211915800-211991800 Weak transcription Muscle Satellite Cultured Cells --
7 chr1:211916800-211994200 Weak transcription Fetal Brain Male brain
8 chr1:211917000-211970400 Strong transcription Monocytes-CD14+_RO01746 blood
9 chr1:211919200-212001200 Weak transcription Gastric stomach
10 chr1:211923000-211991800 Weak transcription HSMM muscle
11 chr1:211924000-212002400 Weak transcription NHLF lung
12 chr1:211935800-211969000 Weak transcription Fetal Heart heart
13 chr1:211936400-211968200 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr1:211938200-211999400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr1:211939600-211978200 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr1:211939600-211992600 Weak transcription Esophagus oesophagus
17 chr1:211939800-212002400 Weak transcription HSMMtube muscle
18 chr1:211940000-212000600 Weak transcription Rectal Smooth Muscle rectum
19 chr1:211943200-211971200 Weak transcription iPS-20b Cell Line embryonic stem cell
20 chr1:211943400-211972000 Weak transcription HUES48 Cell Line embryonic stem cell
21 chr1:211945800-211979000 Weak transcription Colon Smooth Muscle Colon
22 chr1:211946200-211984200 Weak transcription NH-A brain
23 chr1:211947400-212002400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr1:211950000-211987000 Weak transcription Fetal Thymus thymus
25 chr1:211950600-211971800 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr1:211950800-211971200 Weak transcription Placenta Placenta
27 chr1:211951400-211978800 Weak transcription Fetal Lung lung
28 chr1:211951400-211992600 Weak transcription Ovary ovary
29 chr1:211952200-212003000 Weak transcription Placenta Amnion Placenta Amnion
30 chr1:211955200-211969400 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr1:211957400-211967800 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr1:211957600-211985200 Weak transcription Brain Germinal Matrix brain
33 chr1:211957600-211998800 Weak transcription NHDF-Ad bronchial
34 chr1:211957600-212000800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
35 chr1:211957800-211973600 Weak transcription K562 blood
36 chr1:211958000-211984200 Weak transcription HUVEC blood vessel
37 chr1:211959200-211970400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
38 chr1:211960000-211970400 Weak transcription Primary hematopoietic stem cells blood
39 chr1:211960000-211971400 Weak transcription A549 lung
40 chr1:211960800-211982200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
41 chr1:211960800-211987600 Weak transcription Pancreas Pancrea
42 chr1:211961000-211969000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
43 chr1:211961200-212002200 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr1:211962400-211968600 Strong transcription Primary B cells from cord blood blood
45 chr1:211962400-211978600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr1:211962600-211983000 Weak transcription Primary T helper cells fromperipheralblood blood
47 chr1:211963600-211985800 Weak transcription Hela-S3 cervix
48 chr1:211963800-211969600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr1:211963800-211970000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr1:211964200-211967800 Strong transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015