The 2.0 version of rSNPBase

Variant report

Variant rs6670525
Chromosome Location chr1:212005997-212005998
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212004600-212006000 Weak transcription Stomach Mucosa stomach
2 chr1:212004600-212007200 Enhancers Primary B cells from peripheral blood blood
3 chr1:212004600-212007200 Enhancers Fetal Intestine Large intestine
4 chr1:212004600-212008000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr1:212004600-212008000 Enhancers Primary T helper naive cells from peripheral blood blood
6 chr1:212004600-212008200 Enhancers Primary T helper naive cells fromperipheralblood blood
7 chr1:212004600-212008200 Enhancers Primary T helper 17 cells PMA-I stimulated --
8 chr1:212004600-212008200 Enhancers Primary T killer naive cells fromperipheralblood blood
9 chr1:212004600-212008600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
10 chr1:212004800-212006200 Weak transcription Primary monocytes fromperipheralblood blood
11 chr1:212004800-212006400 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr1:212004800-212006400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr1:212004800-212006400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr1:212004800-212006600 Weak transcription Primary neutrophils fromperipheralblood blood
15 chr1:212004800-212007200 Enhancers Primary B cells from cord blood blood
16 chr1:212004800-212007800 Enhancers Primary Natural Killer cells fromperipheralblood blood
17 chr1:212004800-212008000 Enhancers Primary T cells fromperipheralblood blood
18 chr1:212004800-212008000 Enhancers Primary T killer memory cells from peripheral blood blood
19 chr1:212004800-212008200 Enhancers Primary T cells from cord blood blood
20 chr1:212004800-212008600 Enhancers Primary T helper cells PMA-I stimulated --
21 chr1:212005000-212008200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
22 chr1:212005200-212006200 Weak transcription Primary T regulatory cells fromperipheralblood blood
23 chr1:212005200-212006200 Weak transcription Duodenum Mucosa Duodenum
24 chr1:212005200-212006200 Enhancers Small Intestine intestine
25 chr1:212005200-212006200 Weak transcription Dnd41 blood
26 chr1:212005200-212006400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr1:212005200-212006400 Weak transcription Fetal Intestine Small intestine
28 chr1:212005200-212006800 Weak transcription Fetal Thymus thymus
29 chr1:212005200-212007800 Weak transcription Thymus Thymus
30 chr1:212005200-212008000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
31 chr1:212005200-212008200 Enhancers Primary T helper cells fromperipheralblood blood
32 chr1:212005200-212009600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr1:212005400-212006000 Enhancers GM12878-XiMat blood
34 chr1:212005800-212006200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr1:212005800-212006600 Enhancers Monocytes-CD14+_RO01746 blood
36 chr1:212005800-212007200 Enhancers K562 blood
37 chr1:212005800-212007600 Enhancers Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015