The 2.0 version of rSNPBase

Variant report

Variant rs6670960
Chromosome Location chr1:93608027-93608028
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93565200-93625200 Weak transcription Stomach Mucosa stomach
2 chr1:93573400-93627000 Weak transcription Brain Cingulate Gyrus brain
3 chr1:93573800-93609000 Strong transcription Fetal Thymus thymus
4 chr1:93574200-93609000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr1:93574600-93609000 Strong transcription Dnd41 blood
6 chr1:93574600-93630200 Weak transcription Right Ventricle heart
7 chr1:93578800-93613600 Weak transcription Psoas Muscle Psoas
8 chr1:93578800-93620600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr1:93580000-93624000 Weak transcription Placenta Amnion Placenta Amnion
10 chr1:93580200-93643600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr1:93581200-93616800 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr1:93582400-93620400 Weak transcription Small Intestine intestine
13 chr1:93582400-93642800 Weak transcription Gastric stomach
14 chr1:93583200-93628800 Weak transcription Brain Angular Gyrus brain
15 chr1:93583600-93613800 Weak transcription Lung lung
16 chr1:93583600-93623800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr1:93583600-93635400 Weak transcription Pancreas Pancrea
18 chr1:93585200-93609200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr1:93585800-93642200 Weak transcription Esophagus oesophagus
20 chr1:93586200-93623400 Weak transcription Fetal Brain Male brain
21 chr1:93586800-93621000 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr1:93590200-93608600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
23 chr1:93591200-93612600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr1:93591400-93616600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr1:93592000-93608800 Strong transcription HUES48 Cell Line embryonic stem cell
26 chr1:93592000-93609200 Strong transcription iPS-20b Cell Line embryonic stem cell
27 chr1:93592200-93609000 Strong transcription iPS-18 Cell Line embryonic stem cell
28 chr1:93592600-93608600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr1:93592600-93609000 Strong transcription HUES64 Cell Line embryonic stem cell
30 chr1:93592600-93609000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr1:93593000-93614200 Weak transcription Colon Smooth Muscle Colon
32 chr1:93594400-93611400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr1:93595000-93609200 Strong transcription HUES6 Cell Line embryonic stem cell
34 chr1:93595400-93612400 Weak transcription Fetal Heart heart
35 chr1:93595800-93609200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr1:93595800-93635600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr1:93597400-93625400 Weak transcription Rectal Smooth Muscle rectum
38 chr1:93598600-93608200 Strong transcription Primary T regulatory cells fromperipheralblood blood
39 chr1:93598800-93609200 Strong transcription HSMM muscle
40 chr1:93600400-93635400 Weak transcription Spleen Spleen
41 chr1:93601000-93643600 Weak transcription HSMMtube muscle
42 chr1:93601400-93635400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr1:93602000-93614000 Weak transcription Brain Hippocampus Middle brain
44 chr1:93602600-93611400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr1:93602600-93613000 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr1:93602600-93613200 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr1:93602600-93613600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr1:93602600-93613600 Weak transcription Ovary ovary
49 chr1:93602600-93613600 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr1:93602600-93613600 Weak transcription A549 lung

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Last update: Aug 31, 2015