The 2.0 version of rSNPBase

Variant report

Variant rs6671496
Chromosome Location chr1:210517933-210517934
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:210503600-210546800 Weak transcription Fetal Intestine Small intestine
2 chr1:210513000-210540400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr1:210516800-210534400 Weak transcription Fetal Lung lung
4 chr1:210517000-210520000 Weak transcription HSMMtube muscle
5 chr1:210517000-210520000 Weak transcription NH-A brain
6 chr1:210517000-210531400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr1:210517000-210534400 Weak transcription HSMM muscle
8 chr1:210517200-210518000 Weak transcription Esophagus oesophagus
9 chr1:210517200-210518200 Enhancers Primary T helper 17 cells PMA-I stimulated --
10 chr1:210517200-210518200 Weak transcription NHEK skin
11 chr1:210517200-210518600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr1:210517200-210518600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr1:210517200-210518600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
14 chr1:210517200-210518600 Enhancers HMEC breast
15 chr1:210517200-210518600 Enhancers NHDF-Ad bronchial
16 chr1:210517200-210519000 Weak transcription Fetal Heart heart
17 chr1:210517200-210520200 Weak transcription Muscle Satellite Cultured Cells --
18 chr1:210517200-210520600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr1:210517200-210524400 Weak transcription Lung lung
20 chr1:210517200-210524600 Weak transcription Ovary ovary
21 chr1:210517200-210525400 Weak transcription Thymus Thymus
22 chr1:210517200-210534400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr1:210517200-210534400 Weak transcription Brain Anterior Caudate brain
24 chr1:210517200-210534600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr1:210517200-210535800 Weak transcription Right Ventricle heart
26 chr1:210517200-210536000 Weak transcription Fetal Stomach stomach
27 chr1:210517200-210536000 Weak transcription Left Ventricle heart
28 chr1:210517400-210518000 Enhancers Primary B cells from peripheral blood blood
29 chr1:210517400-210518200 Enhancers Osteobl bone
30 chr1:210517400-210518400 Weak transcription Gastric stomach
31 chr1:210517400-210520000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:210517400-210520000 Weak transcription Aorta Aorta
33 chr1:210517400-210525400 Weak transcription Stomach Smooth Muscle stomach
34 chr1:210517400-210533200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr1:210517400-210534400 Weak transcription Adipose Nuclei Adipose
36 chr1:210517600-210519800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr1:210517600-210522400 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr1:210517600-210536000 Weak transcription Rectal Smooth Muscle rectum
39 chr1:210517800-210518000 Enhancers Dnd41 blood
40 chr1:210517800-210519800 Weak transcription GM12878-XiMat blood
41 chr1:210517800-210522200 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015