Variant report

Variant rs6672806
Chromosome Location chr1:224817506-224817507
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:28 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:224810400-224819800 Weak transcription HUES6 Cell Line embryonic stem cell
2 chr1:224811000-224819800 Weak transcription Right Atrium heart
3 chr1:224812600-224819800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr1:224812800-224825200 Weak transcription HMEC breast
5 chr1:224812800-224828200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:224813000-224820200 Weak transcription Dnd41 blood
7 chr1:224814400-224819400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr1:224814600-224819000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr1:224814600-224819400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr1:224814600-224819800 Weak transcription HSMM muscle
11 chr1:224814600-224823000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr1:224814800-224819000 Weak transcription Osteobl bone
13 chr1:224814800-224819200 Weak transcription NHLF lung
14 chr1:224815600-224817800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr1:224815600-224823200 Enhancers Fetal Brain Male brain
16 chr1:224816000-224820200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr1:224816200-224822600 Enhancers Fetal Brain Female brain
18 chr1:224816400-224818400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr1:224816400-224819200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr1:224816400-224819400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr1:224816400-224820400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr1:224816400-224820400 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr1:224816600-224819200 Weak transcription Pancreas Pancrea
24 chr1:224817000-224817600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr1:224817200-224818200 Strong transcription NHDF-Ad bronchial
26 chr1:224817200-224818600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr1:224817200-224819000 Genic enhancers NH-A brain
28 chr1:224817400-224820000 Enhancers Cortex derived primary cultured neurospheres brain

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