The 2.0 version of rSNPBase

Variant report

Variant rs6673803
Chromosome Location chr1:153820986-153820987
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:153781600-153826800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:153791600-153822200 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr1:153791800-153845600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr1:153792000-153822000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr1:153800000-153824400 Weak transcription Brain Germinal Matrix brain
6 chr1:153800600-153824600 Weak transcription Rectal Smooth Muscle rectum
7 chr1:153800800-153821000 Weak transcription Gastric stomach
8 chr1:153800800-153821400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr1:153800800-153822600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr1:153800800-153823600 Weak transcription Fetal Muscle Trunk muscle
11 chr1:153800800-153823800 Weak transcription Stomach Smooth Muscle stomach
12 chr1:153800800-153824200 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr1:153800800-153824400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr1:153800800-153824400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr1:153800800-153824400 Weak transcription Fetal Intestine Large intestine
16 chr1:153800800-153824800 Weak transcription Fetal Lung lung
17 chr1:153800800-153825000 Weak transcription HSMM muscle
18 chr1:153800800-153825400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr1:153800800-153825400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr1:153800800-153825400 Weak transcription Pancreas Pancrea
21 chr1:153800800-153827000 Weak transcription HUVEC blood vessel
22 chr1:153800800-153830800 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr1:153800800-153832600 Weak transcription Aorta Aorta
24 chr1:153800800-153832800 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr1:153800800-153835600 Weak transcription Ovary ovary
26 chr1:153800800-153850800 Weak transcription A549 lung
27 chr1:153800800-153852800 Weak transcription Fetal Brain Female brain
28 chr1:153800800-153852800 Weak transcription Placenta Placenta
29 chr1:153800800-153852800 Weak transcription Left Ventricle heart
30 chr1:153800800-153853000 Weak transcription Fetal Kidney kidney
31 chr1:153801000-153822000 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr1:153801000-153823600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr1:153801000-153823600 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr1:153801000-153824200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr1:153801000-153824400 Weak transcription Fetal Muscle Leg muscle
36 chr1:153801000-153824600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr1:153801200-153821200 Weak transcription Primary hematopoietic stem cells blood
38 chr1:153801200-153823200 Weak transcription H1 Cell Line embryonic stem cell
39 chr1:153801200-153824400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr1:153801200-153824600 Weak transcription HUES6 Cell Line embryonic stem cell
41 chr1:153801200-153829800 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr1:153801200-153829800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
43 chr1:153801400-153823400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr1:153801400-153823400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr1:153801600-153824600 Weak transcription NHEK skin
46 chr1:153801600-153845800 Weak transcription Lung lung
47 chr1:153801800-153821400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr1:153801800-153821600 Weak transcription Primary T helper cells fromperipheralblood blood
49 chr1:153801800-153823800 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr1:153801800-153836600 Weak transcription iPS-20b Cell Line embryonic stem cell

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Last update: Aug 31, 2015