The 2.0 version of rSNPBase

Variant report

Variant rs6675679
Chromosome Location chr1:94508192-94508193
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94492200-94510000 Weak transcription Aorta Aorta
2 chr1:94496800-94508400 Weak transcription Gastric stomach
3 chr1:94501800-94510000 Weak transcription Pancreas Pancrea
4 chr1:94503800-94510200 Weak transcription Ovary ovary
5 chr1:94505200-94509800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:94505400-94509800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr1:94505600-94508800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr1:94505600-94508800 Weak transcription Lung lung
9 chr1:94505600-94509800 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr1:94505600-94509800 Weak transcription Brain Substantia Nigra brain
11 chr1:94505600-94509800 Weak transcription HepG2 liver
12 chr1:94505600-94509800 Weak transcription NHLF lung
13 chr1:94505600-94510000 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr1:94505600-94510000 Weak transcription A549 lung
15 chr1:94505600-94510000 Weak transcription HMEC breast
16 chr1:94505600-94510200 Weak transcription Colon Smooth Muscle Colon
17 chr1:94505600-94511000 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr1:94505600-94511000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr1:94505600-94511400 Weak transcription H1 Cell Line embryonic stem cell
20 chr1:94505600-94514200 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr1:94505800-94508200 Weak transcription Adipose Nuclei Adipose
22 chr1:94505800-94508400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr1:94505800-94508400 Weak transcription Spleen Spleen
24 chr1:94505800-94508800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr1:94505800-94508800 Weak transcription Brain Angular Gyrus brain
26 chr1:94505800-94509800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr1:94505800-94509800 Weak transcription Brain Cingulate Gyrus brain
28 chr1:94505800-94509800 Weak transcription Brain Hippocampus Middle brain
29 chr1:94505800-94509800 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr1:94505800-94510000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr1:94505800-94510000 Weak transcription Right Ventricle heart
32 chr1:94505800-94510000 Weak transcription NHDF-Ad bronchial
33 chr1:94505800-94510200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
34 chr1:94505800-94510600 Weak transcription NHEK skin
35 chr1:94505800-94511000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr1:94505800-94511000 Weak transcription Osteobl bone
37 chr1:94505800-94511200 Weak transcription Fetal Kidney kidney
38 chr1:94505800-94523600 Weak transcription Psoas Muscle Psoas
39 chr1:94506000-94508400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr1:94506000-94508400 Weak transcription Right Atrium heart
41 chr1:94506000-94509800 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr1:94506000-94509800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr1:94506000-94509800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr1:94506000-94510000 Weak transcription NH-A brain
45 chr1:94506000-94510200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr1:94506000-94510200 Weak transcription Placenta Amnion Placenta Amnion
47 chr1:94506200-94509800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr1:94506200-94509800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
49 chr1:94506400-94509800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr1:94506400-94509800 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015