Variant report

Variant rs6676119
Chromosome Location chr1:145060794-145060795
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145047600-145065800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:145055800-145064000 Weak transcription Colon Smooth Muscle Colon
3 chr1:145056800-145062400 Weak transcription Fetal Brain Male brain
4 chr1:145057200-145061000 Enhancers Brain Cingulate Gyrus brain
5 chr1:145057800-145062200 Enhancers Brain Germinal Matrix brain
6 chr1:145057800-145064600 Weak transcription NHLF lung
7 chr1:145058000-145061400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr1:145058000-145062400 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
9 chr1:145058000-145064600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr1:145058600-145061000 Enhancers Brain Angular Gyrus brain
11 chr1:145058600-145061000 Enhancers Brain Anterior Caudate brain
12 chr1:145058600-145061000 Enhancers Brain Hippocampus Middle brain
13 chr1:145058600-145061000 Enhancers K562 blood
14 chr1:145058800-145061000 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
15 chr1:145058800-145061000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
16 chr1:145059000-145061000 Enhancers Brain Inferior Temporal Lobe brain
17 chr1:145059400-145061000 Enhancers Cortex derived primary cultured neurospheres brain
18 chr1:145059400-145061000 Genic enhancers Brain Dorsolateral Prefrontal Cortex brain
19 chr1:145059400-145061800 Weak transcription Psoas Muscle Psoas
20 chr1:145059400-145065400 Weak transcription Muscle Satellite Cultured Cells --
21 chr1:145059600-145060800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
22 chr1:145059600-145060800 Bivalent Enhancer hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr1:145059600-145060800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
24 chr1:145059600-145061800 Weak transcription NHDF-Ad bronchial
25 chr1:145059600-145065600 Weak transcription Osteobl bone
26 chr1:145060000-145060800 Bivalent Enhancer HUES48 Cell Line embryonic stem cell
27 chr1:145060000-145061200 Flanking Active TSS HepG2 liver
28 chr1:145060200-145060800 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr1:145060200-145060800 Weak transcription Pancreas Pancrea
30 chr1:145060200-145061800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr1:145060200-145062000 Weak transcription Aorta Aorta
32 chr1:145060200-145062000 Weak transcription Fetal Muscle Leg muscle
33 chr1:145060400-145061000 Enhancers Brain Substantia Nigra brain
34 chr1:145060400-145061600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr1:145060600-145060800 Bivalent Enhancer ES-WA7 Cell Line embryonic stem cell
36 chr1:145060600-145060800 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
37 chr1:145060600-145062000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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