Variant report

Variant rs6677132
Chromosome Location chr1:225967597-225967598
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:225965000-225967600 Active TSS GM12878-XiMat blood
2 chr1:225965200-225967600 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr1:225965400-225967600 Active TSS Stomach Smooth Muscle stomach
4 chr1:225965400-225967600 Active TSS NH-A brain
5 chr1:225965800-225968200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr1:225966200-225967800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr1:225966200-225969000 Transcr. at gene 5' and 3' Dnd41 blood
8 chr1:225966200-225973400 Weak transcription Esophagus oesophagus
9 chr1:225966400-225967800 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:225966400-225967800 Transcr. at gene 5' and 3' HUES48 Cell Line embryonic stem cell
11 chr1:225966400-225967800 Transcr. at gene 5' and 3' K562 blood
12 chr1:225966400-225968000 Flanking Active TSS Primary T cells from cord blood blood
13 chr1:225966600-225967800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr1:225966600-225967800 Flanking Active TSS Brain Hippocampus Middle brain
15 chr1:225966600-225967800 Transcr. at gene 5' and 3' Rectal Mucosa Donor 29 rectum
16 chr1:225966600-225968000 Transcr. at gene 5' and 3' HUES64 Cell Line embryonic stem cell
17 chr1:225966600-225968000 Flanking Active TSS Duodenum Smooth Muscle Duodenum
18 chr1:225966800-225967600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
19 chr1:225966800-225967800 Flanking Active TSS Muscle Satellite Cultured Cells --
20 chr1:225966800-225967800 Enhancers Stomach Mucosa stomach
21 chr1:225966800-225967800 Transcr. at gene 5' and 3' HUVEC blood vessel
22 chr1:225966800-225968000 Enhancers Fetal Heart heart
23 chr1:225966800-225968200 Flanking Active TSS Brain Germinal Matrix brain
24 chr1:225966800-225968200 Enhancers Spleen Spleen
25 chr1:225966800-225968800 Genic enhancers Primary B cells from peripheral blood blood
26 chr1:225966800-225969800 Enhancers Primary monocytes fromperipheralblood blood
27 chr1:225966800-225970400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
28 chr1:225966800-225972600 Weak transcription Placenta Amnion Placenta Amnion
29 chr1:225966800-225978600 Weak transcription ES-WA7 Cell Line embryonic stem cell
30 chr1:225967000-225967600 Active TSS ES-I3 Cell Line embryonic stem cell
31 chr1:225967000-225967600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr1:225967000-225967600 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
33 chr1:225967000-225967600 Enhancers Rectal Mucosa Donor 31 rectum
34 chr1:225967000-225967600 Flanking Active TSS HMEC breast
35 chr1:225967000-225967800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr1:225967000-225967800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
37 chr1:225967000-225967800 Flanking Active TSS Fetal Brain Female brain
38 chr1:225967000-225967800 Transcr. at gene 5' and 3' Fetal Lung lung
39 chr1:225967000-225968000 Enhancers NHDF-Ad bronchial
40 chr1:225967000-225968200 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
41 chr1:225967000-225968200 Enhancers Fetal Muscle Trunk muscle
42 chr1:225967000-225968200 Enhancers Gastric stomach
43 chr1:225967000-225968200 Enhancers Lung lung
44 chr1:225967000-225968200 Enhancers Pancreas Pancrea
45 chr1:225967000-225968600 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
46 chr1:225967000-225968600 Enhancers Fetal Brain Male brain
47 chr1:225967000-225969000 Enhancers Brain Inferior Temporal Lobe brain
48 chr1:225967000-225970400 Enhancers Primary T helper 17 cells PMA-I stimulated --
49 chr1:225967000-225971800 Enhancers Primary neutrophils fromperipheralblood blood
50 chr1:225967000-225972200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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