Variant report

Variant	rs6679184
Chromosome Location	chr1:85190743-85190744
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:85083999..85086788-chr1:85190313..85192578,2	K562	blood:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs1770573	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3121184	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4614284	0.91[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4907090	1.00[ASN][1000 genomes]
rs6576723	0.86[CEU][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9725395	1.00[ASN][1000 genomes]

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:85187200-85192000	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr1:85187400-85191600	Weak transcription	Fetal Muscle Leg	muscle
3	chr1:85187400-85191800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr1:85187400-85192000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr1:85187400-85192000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr1:85187400-85192000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr1:85187400-85192000	Weak transcription	NHEK	skin
8	chr1:85187400-85192400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr1:85187400-85192600	Weak transcription	Fetal Lung	lung
10	chr1:85187400-85193000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr1:85187600-85191800	Weak transcription	NHLF	lung
12	chr1:85187600-85192400	Weak transcription	Colon Smooth Muscle	Colon
13	chr1:85187600-85192800	Weak transcription	Cortex derived primary cultured neurospheres	brain
14	chr1:85188600-85191200	Weak transcription	Duodenum Mucosa	Duodenum
15	chr1:85189400-85191000	Enhancers	Liver	Liver
16	chr1:85189400-85191800	Enhancers	iPS-15b Cell Line	embryonic stem cell
17	chr1:85189400-85192200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr1:85189600-85191200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr1:85189600-85191400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
20	chr1:85189600-85192000	Weak transcription	Osteobl	bone
21	chr1:85189800-85191800	Weak transcription	NHDF-Ad	bronchial
22	chr1:85189800-85192400	Weak transcription	Rectal Smooth Muscle	rectum
23	chr1:85190000-85194600	Weak transcription	HUES48 Cell Line	embryonic stem cell
24	chr1:85190200-85191800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr1:85190400-85191000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
26	chr1:85190600-85191600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
27	chr1:85190600-85199800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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