The 2.0 version of rSNPBase

Variant report

Variant rs6681403
Chromosome Location chr1:95265233-95265234
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95242600-95268000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr1:95251000-95271600 Weak transcription Small Intestine intestine
3 chr1:95256800-95265800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr1:95258200-95267800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:95258200-95284800 Weak transcription Gastric stomach
6 chr1:95259200-95266600 Weak transcription A549 lung
7 chr1:95259200-95267400 Weak transcription Fetal Muscle Leg muscle
8 chr1:95259400-95266400 Weak transcription Colon Smooth Muscle Colon
9 chr1:95259400-95267000 Weak transcription Fetal Stomach stomach
10 chr1:95259400-95267200 Weak transcription HUES64 Cell Line embryonic stem cell
11 chr1:95259400-95267200 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr1:95259400-95267200 Weak transcription Stomach Mucosa stomach
13 chr1:95259400-95267200 Weak transcription HSMMtube muscle
14 chr1:95259600-95265600 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr1:95259600-95267200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr1:95259600-95267200 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr1:95259600-95267800 Weak transcription Left Ventricle heart
18 chr1:95260800-95267400 Enhancers HepG2 liver
19 chr1:95261400-95266800 Weak transcription Dnd41 blood
20 chr1:95261400-95267200 Weak transcription Primary T cells from cord blood blood
21 chr1:95261400-95267200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr1:95261600-95267200 Weak transcription Primary hematopoietic stem cells blood
23 chr1:95261600-95268200 Enhancers Primary neutrophils fromperipheralblood blood
24 chr1:95261800-95267800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr1:95261800-95267800 Weak transcription Pancreas Pancrea
26 chr1:95261800-95267800 Weak transcription Spleen Spleen
27 chr1:95261800-95269200 Weak transcription Lung lung
28 chr1:95262200-95267000 Weak transcription HUVEC blood vessel
29 chr1:95262600-95267800 Weak transcription Placenta Placenta
30 chr1:95262800-95267000 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr1:95262800-95267800 Weak transcription Ovary ovary
32 chr1:95263000-95267400 Weak transcription HSMM muscle
33 chr1:95263600-95266400 Weak transcription Brain Hippocampus Middle brain
34 chr1:95264000-95266200 Weak transcription NHLF lung
35 chr1:95264200-95265400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
36 chr1:95264200-95265800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr1:95264200-95267200 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr1:95264400-95266200 Weak transcription Fetal Kidney kidney
39 chr1:95264400-95267200 Weak transcription Fetal Lung lung
40 chr1:95264400-95267200 Enhancers HMEC breast
41 chr1:95264400-95267800 Weak transcription Primary B cells from cord blood blood
42 chr1:95264600-95265800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr1:95264600-95267200 Enhancers Muscle Satellite Cultured Cells --
44 chr1:95264800-95266200 Weak transcription Breast Myoepithelial Primary Cells Breast
45 chr1:95265000-95265600 Weak transcription Adipose Nuclei Adipose
46 chr1:95265000-95265600 Weak transcription NHDF-Ad bronchial
47 chr1:95265000-95265800 Enhancers Fetal Intestine Large intestine
48 chr1:95265000-95267000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr1:95265000-95267000 Weak transcription Primary monocytes fromperipheralblood blood
50 chr1:95265000-95267000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015