Variant report

Variant rs668567
Chromosome Location chr18:29859715-29859716
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:29835200-29861600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr18:29837400-29867200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr18:29839800-29871800 Weak transcription HSMMtube muscle
4 chr18:29843000-29867000 Weak transcription Brain Angular Gyrus brain
5 chr18:29846000-29867000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr18:29848200-29863600 Weak transcription Muscle Satellite Cultured Cells --
7 chr18:29848400-29860200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr18:29848600-29867200 Weak transcription Lung lung
9 chr18:29848800-29866600 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr18:29849400-29867000 Weak transcription Esophagus oesophagus
11 chr18:29849800-29867000 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr18:29850000-29860600 Weak transcription Brain Substantia Nigra brain
13 chr18:29850000-29877600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr18:29850200-29866600 Weak transcription Fetal Lung lung
15 chr18:29850200-29867000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr18:29850200-29867000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr18:29850400-29860200 Weak transcription Left Ventricle heart
18 chr18:29850400-29865800 Weak transcription Fetal Muscle Trunk muscle
19 chr18:29850400-29866600 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr18:29850400-29867200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr18:29850600-29860400 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr18:29850600-29860600 Weak transcription Fetal Muscle Leg muscle
23 chr18:29852200-29865000 Weak transcription Fetal Stomach stomach
24 chr18:29855000-29861000 Enhancers Fetal Intestine Small intestine
25 chr18:29855200-29860800 Enhancers Fetal Intestine Large intestine
26 chr18:29857000-29863200 Weak transcription Right Atrium heart
27 chr18:29857200-29860400 Weak transcription Small Intestine intestine
28 chr18:29857400-29861000 Enhancers Duodenum Mucosa Duodenum
29 chr18:29857400-29862400 Weak transcription Right Ventricle heart
30 chr18:29857800-29860200 Weak transcription Brain Anterior Caudate brain
31 chr18:29857800-29861000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr18:29857800-29863400 Weak transcription Brain Hippocampus Middle brain
33 chr18:29858000-29860600 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr18:29858200-29860200 Weak transcription Aorta Aorta
35 chr18:29858200-29860200 Weak transcription Brain Inferior Temporal Lobe brain
36 chr18:29858200-29865000 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr18:29858600-29862400 Weak transcription Fetal Heart heart
38 chr18:29858600-29877600 Weak transcription Fetal Kidney kidney
39 chr18:29859000-29860800 Weak transcription Brain Cingulate Gyrus brain
40 chr18:29859000-29864000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr18:29859000-29865200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr18:29859000-29866600 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr18:29859000-29867600 Weak transcription Colonic Mucosa Colon
44 chr18:29859000-29870400 Weak transcription HepG2 liver
45 chr18:29859200-29860200 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr18:29859200-29860200 Weak transcription Stomach Mucosa stomach
47 chr18:29859400-29860000 Weak transcription Ovary ovary
48 chr18:29859400-29860200 Weak transcription Pancreas Pancrea
49 chr18:29859400-29860400 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr18:29859400-29860600 Weak transcription Adipose Nuclei Adipose

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