Variant report

Variant rs6689229
Chromosome Location chr1:247241636-247241637
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:247240200-247243000 Active TSS HUES64 Cell Line embryonic stem cell
2 chr1:247240400-247242400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr1:247240400-247242600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr1:247240400-247242800 Active TSS Breast Myoepithelial Primary Cells Breast
5 chr1:247240400-247243000 Active TSS HUES6 Cell Line embryonic stem cell
6 chr1:247240600-247242200 Active TSS H1 Cell Line embryonic stem cell
7 chr1:247240600-247242600 Active TSS Brain Germinal Matrix brain
8 chr1:247240800-247241800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr1:247240800-247242400 Active TSS Duodenum Smooth Muscle Duodenum
10 chr1:247240800-247242600 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:247240800-247242600 Active TSS A549 lung
12 chr1:247240800-247242800 Active TSS Fetal Brain Female brain
13 chr1:247240800-247243000 Active TSS ES-I3 Cell Line embryonic stem cell
14 chr1:247240800-247243000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr1:247241000-247241800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
16 chr1:247241000-247241800 Active TSS Fetal Muscle Trunk muscle
17 chr1:247241000-247242000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
18 chr1:247241000-247242200 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr1:247241000-247242200 Active TSS Rectal Mucosa Donor 31 rectum
20 chr1:247241000-247242400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr1:247241000-247242400 Active TSS Brain Hippocampus Middle brain
22 chr1:247241000-247242600 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
23 chr1:247241000-247242600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
24 chr1:247241000-247242600 Active TSS Brain Inferior Temporal Lobe brain
25 chr1:247241000-247242600 Active TSS Left Ventricle heart
26 chr1:247241000-247242800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr1:247241000-247242800 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr1:247241000-247242800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
29 chr1:247241000-247242800 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
30 chr1:247241000-247242800 Active TSS Aorta Aorta
31 chr1:247241000-247242800 Active TSS Fetal Kidney kidney
32 chr1:247241000-247242800 Active TSS Gastric stomach
33 chr1:247241000-247242800 Active TSS Right Atrium heart
34 chr1:247241000-247242800 Active TSS Right Ventricle heart
35 chr1:247241000-247242800 Active TSS HSMM muscle
36 chr1:247241000-247243000 Active TSS H9 Cell Line embryonic stem cell
37 chr1:247241000-247243200 Flanking Active TSS Primary B cells from cord blood blood
38 chr1:247241200-247242000 Active TSS Placenta Amnion Placenta Amnion
39 chr1:247241200-247242200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
40 chr1:247241200-247242200 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr1:247241200-247242200 Active TSS Primary T helper naive cells fromperipheralblood blood
42 chr1:247241200-247242200 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
43 chr1:247241200-247242200 Active TSS Fetal Brain Male brain
44 chr1:247241200-247242200 Active TSS Fetal Thymus thymus
45 chr1:247241200-247242200 Active TSS Lung lung
46 chr1:247241200-247242200 Active TSS HUVEC blood vessel
47 chr1:247241200-247242200 Active TSS NHDF-Ad bronchial
48 chr1:247241200-247242400 Active TSS HUES48 Cell Line embryonic stem cell
49 chr1:247241200-247242400 Active TSS iPS-20b Cell Line embryonic stem cell
50 chr1:247241200-247242400 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood

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