The 2.0 version of rSNPBase

Variant report

Variant rs6694938
Chromosome Location chr1:225645714-225645715
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:225634600-225648400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr1:225635000-225647800 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr1:225636200-225650000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:225637800-225647600 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr1:225637800-225648400 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr1:225639400-225647000 Weak transcription Esophagus oesophagus
7 chr1:225639400-225648000 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chr1:225642400-225647800 Weak transcription Lung lung
9 chr1:225642400-225650800 Weak transcription Right Atrium heart
10 chr1:225642400-225653000 Weak transcription Primary B cells from cord blood blood
11 chr1:225642400-225655200 Weak transcription Small Intestine intestine
12 chr1:225642600-225647200 Weak transcription Thymus Thymus
13 chr1:225642600-225647800 Weak transcription Primary T helper cells fromperipheralblood blood
14 chr1:225642600-225655000 Weak transcription Brain Hippocampus Middle brain
15 chr1:225642800-225646000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr1:225642800-225646400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr1:225642800-225646400 Weak transcription HSMM muscle
18 chr1:225642800-225647600 Weak transcription Fetal Muscle Trunk muscle
19 chr1:225642800-225647600 Weak transcription Fetal Stomach stomach
20 chr1:225642800-225647800 Weak transcription HUVEC blood vessel
21 chr1:225642800-225648000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
22 chr1:225642800-225648800 Weak transcription Pancreas Pancrea
23 chr1:225642800-225650000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr1:225642800-225652800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr1:225643000-225645800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr1:225643000-225645800 Weak transcription HSMMtube muscle
27 chr1:225643000-225646000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr1:225643000-225647000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr1:225643000-225647000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr1:225643000-225647000 Weak transcription NHLF lung
31 chr1:225643000-225647200 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr1:225643000-225647400 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr1:225643000-225647600 Weak transcription A549 lung
34 chr1:225643000-225648000 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr1:225643000-225648400 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr1:225643000-225648400 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr1:225643000-225648600 Weak transcription Stomach Mucosa stomach
38 chr1:225643000-225650400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr1:225643000-225651000 Weak transcription Placenta Amnion Placenta Amnion
40 chr1:225643200-225645800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr1:225643200-225645800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr1:225643200-225645800 Weak transcription NH-A brain
43 chr1:225643200-225645800 Weak transcription Osteobl bone
44 chr1:225643200-225647000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr1:225643200-225647000 Weak transcription Primary T killer naive cells fromperipheralblood blood
46 chr1:225643200-225647000 Weak transcription Muscle Satellite Cultured Cells --
47 chr1:225643200-225647000 Weak transcription HMEC breast
48 chr1:225643200-225647000 Weak transcription NHDF-Ad bronchial
49 chr1:225643200-225647000 Weak transcription NHEK skin
50 chr1:225643200-225647800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015