Variant report

Variant	rs66964608
Chromosome Location	chr14:69738320-69738321
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs2331958	0.97[AFR][1000 genomes];0.96[EUR][1000 genomes]
rs68114783	0.93[AFR][1000 genomes];0.96[EUR][1000 genomes]
rs72625665	0.85[EUR][1000 genomes]
rs72625666	0.96[EUR][1000 genomes]
rs72625667	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3370420	chr14:69734099-69738497	Enhancers Weak transcription Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69730800-69740200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr14:69730800-69754000	Weak transcription	Brain Anterior Caudate	brain
3	chr14:69731800-69738400	Enhancers	Right Ventricle	heart
4	chr14:69733000-69748000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr14:69733200-69738400	Enhancers	Left Ventricle	heart
6	chr14:69735800-69771600	Weak transcription	Fetal Intestine Small	intestine
7	chr14:69736600-69740000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr14:69736800-69740800	Weak transcription	HSMMtube	muscle
9	chr14:69737000-69738400	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr14:69737400-69738400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr14:69737600-69738400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr14:69737800-69738400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr14:69737800-69738400	Enhancers	Muscle Satellite Cultured Cells	--
14	chr14:69737800-69738400	Enhancers	Fetal Brain Female	brain
15	chr14:69738200-69738400	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
16	chr14:69738200-69738400	Enhancers	Right Atrium	heart
17	chr14:69738200-69738600	Enhancers	Fetal Heart	heart
18	chr14:69738200-69758200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links