The 2.0 version of rSNPBase

Variant report

Variant rs6697762
Chromosome Location chr1:61823163-61823164
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:61801200-61824600 Weak transcription Gastric stomach
2 chr1:61804400-61851400 Weak transcription Small Intestine intestine
3 chr1:61804400-61854600 Weak transcription Placenta Placenta
4 chr1:61805800-61848800 Weak transcription Pancreas Pancrea
5 chr1:61810200-61824600 Weak transcription Primary hematopoietic stem cells blood
6 chr1:61810200-61827600 Weak transcription Brain Germinal Matrix brain
7 chr1:61810400-61824200 Weak transcription Fetal Intestine Small intestine
8 chr1:61810400-61828000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr1:61810600-61824400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr1:61810600-61828000 Weak transcription Rectal Smooth Muscle rectum
11 chr1:61810600-61831600 Weak transcription Stomach Mucosa stomach
12 chr1:61810800-61824400 Weak transcription Brain Anterior Caudate brain
13 chr1:61810800-61827800 Weak transcription Brain Cingulate Gyrus brain
14 chr1:61813800-61829800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr1:61814000-61848800 Weak transcription Fetal Adrenal Gland Adrenal Gland
16 chr1:61814200-61823600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr1:61814600-61841200 Weak transcription Psoas Muscle Psoas
18 chr1:61814600-61848800 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr1:61814800-61827800 Weak transcription Brain Substantia Nigra brain
20 chr1:61818000-61823400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr1:61818400-61827400 Strong transcription Cortex derived primary cultured neurospheres brain
22 chr1:61818600-61837600 Weak transcription Fetal Brain Male brain
23 chr1:61818800-61824400 Weak transcription HMEC breast
24 chr1:61818800-61824800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr1:61818800-61835800 Weak transcription Esophagus oesophagus
26 chr1:61819000-61824400 Weak transcription A549 lung
27 chr1:61819000-61832800 Weak transcription Brain Angular Gyrus brain
28 chr1:61819000-61848800 Weak transcription Lung lung
29 chr1:61819200-61824400 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr1:61819200-61824600 Weak transcription Aorta Aorta
31 chr1:61819200-61824600 Weak transcription Hela-S3 cervix
32 chr1:61819200-61824800 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr1:61819200-61832800 Weak transcription Brain Inferior Temporal Lobe brain
34 chr1:61819400-61823200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr1:61819600-61824600 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr1:61819800-61824200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr1:61819800-61824800 Weak transcription Fetal Brain Female brain
38 chr1:61819800-61824800 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr1:61820200-61824600 Weak transcription Ovary ovary
40 chr1:61820400-61823200 Weak transcription Stomach Smooth Muscle stomach
41 chr1:61820400-61824400 Weak transcription Fetal Lung lung
42 chr1:61820400-61824600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr1:61820600-61827600 Weak transcription Brain Hippocampus Middle brain
44 chr1:61820600-61834600 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr1:61820600-61836400 Weak transcription Duodenum Mucosa Duodenum
46 chr1:61820600-61840600 Weak transcription NHEK skin
47 chr1:61820600-61848800 Weak transcription Monocytes-CD14+_RO01746 blood
48 chr1:61820800-61824400 Weak transcription Adipose Nuclei Adipose
49 chr1:61821000-61827600 Strong transcription Fetal Muscle Leg muscle
50 chr1:61822000-61824400 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015