The 2.0 version of rSNPBase

Variant report

Variant rs6699673
Chromosome Location chr1:246785113-246785114
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:246739000-246806200 Weak transcription Aorta Aorta
2 chr1:246755400-246832800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr1:246772200-246795600 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr1:246772600-246790600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:246772600-246795600 Weak transcription HepG2 liver
6 chr1:246772800-246789200 Weak transcription Ovary ovary
7 chr1:246773000-246790200 Weak transcription Small Intestine intestine
8 chr1:246773000-246790200 Weak transcription HSMM muscle
9 chr1:246773000-246792400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr1:246773200-246799000 Weak transcription Fetal Lung lung
11 chr1:246773600-246795400 Weak transcription Placenta Placenta
12 chr1:246773800-246795800 Weak transcription Hela-S3 cervix
13 chr1:246774000-246792600 Weak transcription Primary neutrophils fromperipheralblood blood
14 chr1:246774400-246785600 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr1:246774600-246800400 Weak transcription Pancreas Pancrea
16 chr1:246774800-246795600 Weak transcription Brain Substantia Nigra brain
17 chr1:246776000-246790000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr1:246776400-246790400 Weak transcription Brain Hippocampus Middle brain
19 chr1:246776600-246790600 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr1:246776600-246794000 Strong transcription Primary T regulatory cells fromperipheralblood blood
21 chr1:246776800-246785400 Weak transcription Brain Inferior Temporal Lobe brain
22 chr1:246776800-246786800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr1:246776800-246790200 Weak transcription Brain Angular Gyrus brain
24 chr1:246776800-246795600 Weak transcription HUVEC blood vessel
25 chr1:246777000-246796000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr1:246777000-246799800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr1:246777000-246802000 Weak transcription NHEK skin
28 chr1:246778600-246790200 Weak transcription Fetal Kidney kidney
29 chr1:246779400-246785400 Weak transcription Fetal Heart heart
30 chr1:246779600-246797200 Weak transcription Colonic Mucosa Colon
31 chr1:246779800-246795600 Weak transcription Esophagus oesophagus
32 chr1:246780000-246795600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr1:246780200-246785400 Weak transcription Left Ventricle heart
34 chr1:246780200-246790200 Weak transcription Right Ventricle heart
35 chr1:246780800-246785200 Weak transcription Brain Germinal Matrix brain
36 chr1:246780800-246798000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr1:246780800-246806400 Weak transcription Brain Cingulate Gyrus brain
38 chr1:246780800-246813400 Strong transcription Primary hematopoietic stem cells short term culture blood
39 chr1:246781000-246785400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr1:246781000-246785400 Weak transcription NHDF-Ad bronchial
41 chr1:246781000-246785800 Strong transcription Primary T cells from cord blood blood
42 chr1:246781000-246800000 Weak transcription HMEC breast
43 chr1:246781000-246803000 Weak transcription Brain Anterior Caudate brain
44 chr1:246781200-246785400 Weak transcription Osteobl bone
45 chr1:246781200-246787400 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr1:246781200-246795600 Weak transcription A549 lung
47 chr1:246781200-246797400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
48 chr1:246781200-246798800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr1:246781400-246794400 Weak transcription Muscle Satellite Cultured Cells --
50 chr1:246781400-246800400 Weak transcription H9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015